Jatropha Genome Database

JcCB0267821.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0267821.20 + phase: 0 
         (243 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g044040.1 Plant-specific domain of unknown function 3...   247   3e-66
IMGA|Medtr8g044030.1 Plant-specific domain of unknown function 3...   242   1e-64
IMGA|Medtr3g144870.1 Plant-specific domain of unknown function 3...   225   1e-59
IMGA|Medtr3g148270.1 Plant-specific domain of unknown function 3...   160   4e-40
IMGA|Medtr8g115750.1 Plant-specific domain of unknown function 3...   154   4e-38
IMGA|Medtr7g070580.1 Plant-specific domain of unknown function 3...   107   4e-24
IMGA|Medtr3g102280.1 Plant-specific domain of unknown function 3...   106   1e-23

>IMGA|Medtr8g044040.1 Plant-specific domain of unknown function 3588
           chr08_pseudomolecule_IMGAG_V3 9695537-9697728 E
           EGN_Mt090430 20090702
          Length = 247

 Score =  247 bits (631), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 127/217 (58%), Positives = 153/217 (70%), Gaps = 8/217 (3%)

Query: 35  ISLQQPTGKDS-SKSAKLLXXXXXXXXXXPIITPTCKMLG-NGLH---DKYIHGGTRMTG 89
           ISLQ    K   S + K            PII P+CK+   NG H   +  IHGGTR+TG
Sbjct: 31  ISLQPANSKSKRSSTNKFFGKFRSMFRSFPIIVPSCKLPTMNGNHRTSETIIHGGTRITG 90

Query: 90  TLFGHRKTRINLAIQENPXXXXXXXXXXXXXXGKLLQDMGMGLVRIALECEKRR-NEKTK 148
           TLFG+RK R+NLA QE+               GKLLQDMGMGL RIALECEK   N+KTK
Sbjct: 91  TLFGYRKARVNLAFQEDSKCHPFLLLELAIPTGKLLQDMGMGLNRIALECEKHSSNDKTK 150

Query: 149 IIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAGVIPED-GDHLDGELTYM 207
           I++EPIWT++CNG+K GYGVKR+PTD+DL V+Q+LH +S+  GV+P D  D  DGEL+YM
Sbjct: 151 IVDEPIWTLFCNGKKMGYGVKRDPTDDDLYVIQMLHAVSVAVGVLPSDMSDPQDGELSYM 210

Query: 208 RAHFERVVGSKDSETYYMMNPDGN-NGPELTIFFVRI 243
           RAHFERV+GSKDSETYYMM PDGN NGPEL++FFVR+
Sbjct: 211 RAHFERVIGSKDSETYYMMMPDGNSNGPELSVFFVRV 247


>IMGA|Medtr8g044030.1 Plant-specific domain of unknown function 3588
           chr08_pseudomolecule_IMGAG_V3 9691309-9692082 H
           EGN_Mt090430 20090702
          Length = 257

 Score =  242 bits (617), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 126/217 (58%), Positives = 151/217 (69%), Gaps = 8/217 (3%)

Query: 35  ISLQQPTGKDSSKSA-KLLXXXXXXXXXXPIITPTCKMLG-NGLH---DKYIHGGTRMTG 89
           I+LQ    K    S  KL           PII P+CKM   NG H   +  IHGG R+TG
Sbjct: 41  INLQPANSKSKQNSTNKLFGKFRSMFRSFPIIVPSCKMPTMNGNHRTSETIIHGGIRITG 100

Query: 90  TLFGHRKTRINLAIQENPXXXXXXXXXXXXXXGKLLQDMGMGLVRIALECEKRR-NEKTK 148
           TLFG+RK R+NLA QE+               GKLLQDMGMGL RIALECEK   N+KTK
Sbjct: 101 TLFGYRKARVNLAFQEDSKCHPFLLLELAIPTGKLLQDMGMGLNRIALECEKHSSNDKTK 160

Query: 149 IIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAGVIPED-GDHLDGELTYM 207
           I++EPIWT++CNG+K GYGVKR+PTD+DL V+Q+LH +S+  G +P D  D  DGEL+YM
Sbjct: 161 IVDEPIWTLFCNGKKMGYGVKRDPTDDDLYVIQMLHSVSVAVGELPSDMSDPQDGELSYM 220

Query: 208 RAHFERVVGSKDSETYYMMNPDGN-NGPELTIFFVRI 243
           RAHFERV+GSKDSETYYMM PDGN NGPEL++FFVR+
Sbjct: 221 RAHFERVIGSKDSETYYMMMPDGNSNGPELSVFFVRV 257


>IMGA|Medtr3g144870.1 Plant-specific domain of unknown function 3588
           chr03_pseudomolecule_IMGAG_V3 37676396-37675617 H
           EGN_Mt090430 20090702
          Length = 259

 Score =  225 bits (574), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 120/221 (54%), Positives = 150/221 (67%), Gaps = 13/221 (5%)

Query: 35  ISLQQPTGKDSSKSAKLLXXXXXXXXXXPIITPTCKM--LGNGLHDKYIH------GGTR 86
           ISL QP+ K   K+ K++          PIITP CK     NG  D   H       GT+
Sbjct: 40  ISLVQPSHKRRHKT-KVVRVFRSVFRSLPIITPVCKFPSFPNGTPDSQYHINIGGSTGTK 98

Query: 87  MTGTLFGHRKTRINLAIQENPXXXXXXXXXXXXXXGKLLQDMGMGLVRIALECEKRRN-E 145
           ++GTLFGHRK R++ +IQENP                L ++M  G+VR+ALECEKR++ +
Sbjct: 99  ISGTLFGHRKGRVSFSIQENPRCLPSLVIELSMQTCMLQKEMAAGMVRVALECEKRQDKD 158

Query: 146 KTKIIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAGVIP--EDGDHLDGE 203
           KT +IEEP+WTMYCNG+K+GYGVKRE T EDL VM+IL  ++MGAGV+P   + D++DGE
Sbjct: 159 KTLLIEEPVWTMYCNGKKTGYGVKREATVEDLHVMEILKAVTMGAGVVPMNNEADNVDGE 218

Query: 204 LTYMRAHFERVVGSKDSETYYMMNPDG-NNGPELTIFFVRI 243
           L YMRA FE VVGSKDSET YM++PDG NNGPELTIFFVRI
Sbjct: 219 LAYMRASFEHVVGSKDSETLYMLSPDGNNNGPELTIFFVRI 259


>IMGA|Medtr3g148270.1 Plant-specific domain of unknown function 3588
           chr03_pseudomolecule_IMGAG_V3 38570942-38571813 E
           EGN_Mt090430 20090702
          Length = 237

 Score =  160 bits (406), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 87/191 (45%), Positives = 120/191 (62%), Gaps = 12/191 (6%)

Query: 63  PIITPTCKMLGN-GLHDKYIHGGTRMTGTLFGHRKTRINLAIQENPXXXXXXXXXXXXXX 121
           P++T  CKM+   G   K +   +  TGT+FG+RK R+++AIQE+               
Sbjct: 46  PMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSIAIQEDTRQMPIFLIELPMLT 105

Query: 122 GKLLQDMGMGLVRIALECEKRRNEKTKIIEEPIWTMYCNGRKSGYGVKREPT-DEDLVVM 180
             L ++M   +VRIALE E + N+K K++EE +W +YCNGRK GY ++R+   DE+L VM
Sbjct: 106 SALNKEMSSDIVRIALESETKTNKK-KLLEEFVWAVYCNGRKVGYSIRRKQMGDEELQVM 164

Query: 181 QILHVISMGAGVIPEDGDHLDG----ELTYMRAHFERVVGSKDSETYYMMNPDGN----- 231
           Q L  +SMGAGV+P   DH +     ++TYMR  FERV+GSKDSE +YM+NPD N     
Sbjct: 165 QHLRGVSMGAGVLPTASDHKESSDGDQMTYMRGRFERVIGSKDSEAFYMINPDNNINNGA 224

Query: 232 NGPELTIFFVR 242
            GPE +IFFVR
Sbjct: 225 QGPEFSIFFVR 235


>IMGA|Medtr8g115750.1 Plant-specific domain of unknown function 3588
           chr08_pseudomolecule_IMGAG_V3 26073286-26074693 E
           EGN_Mt090430 20090702
          Length = 255

 Score =  154 bits (389), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 111/166 (66%), Gaps = 6/166 (3%)

Query: 84  GTRMTGTLFGHRKTRINLAIQENPXXXXXXXXXXXXXXGKLLQDMGMGLVRIALECEKRR 143
           G+R+ GTLFG+R+  ++ A Q++P                L+++M  GLVRIALEC+K +
Sbjct: 90  GSRVVGTLFGYRRGHVHFAFQKDPTSQPAFLIELATPISGLVREMASGLVRIALECDKVK 149

Query: 144 NEKT-----KIIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAGVIPE-DG 197
            ++      ++++EP+W  YCNG+K G+G +RE  ++D  +++ +  ISMGAGV+P  + 
Sbjct: 150 EKEGEKKSLRLLQEPLWRTYCNGKKCGFGNRRECGEKDWEILKAVEPISMGAGVLPGGEA 209

Query: 198 DHLDGELTYMRAHFERVVGSKDSETYYMMNPDGNNGPELTIFFVRI 243
              DGE+ YMRA FER+VGS+DSE +YMMNPD N  PEL+++ +R+
Sbjct: 210 GCSDGEVMYMRARFERIVGSRDSEAFYMMNPDSNGAPELSVYLLRV 255


>IMGA|Medtr7g070580.1 Plant-specific domain of unknown function 3588
           chr07_pseudomolecule_IMGAG_V3 14276448-14277137 H
           EGN_Mt090430 20090702
          Length = 229

 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 90/158 (56%), Gaps = 2/158 (1%)

Query: 87  MTGTLFGHRKTRINLAIQ-ENPXXXXXXXXXXXXXXGKLLQDMGMGLVRIALECEKRRNE 145
           + GT+FG+R+  +   IQ +                  L+ +M  GLVRIALE     + 
Sbjct: 65  VIGTIFGNRRGHVWFCIQTDRTHVKPILLLELPISTNSLVHEMRNGLVRIALESTTTTSS 124

Query: 146 KTKIIEE-PIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAGVIPEDGDHLDGEL 204
            T  +   P++T +CNGRK+G+  +R   D    ++Q +  +++GAGVIP        EL
Sbjct: 125 PTCPLRSIPLFTAFCNGRKAGFAARRRAGDSVRNILQTMQCVTVGAGVIPSGFGSDSEEL 184

Query: 205 TYMRAHFERVVGSKDSETYYMMNPDGNNGPELTIFFVR 242
            YMRA+FE VVG+ DSE+++++NPD + G EL++F +R
Sbjct: 185 MYMRANFEHVVGNADSESFHLINPDESTGQELSVFLLR 222


>IMGA|Medtr3g102280.1 Plant-specific domain of unknown function 3588
           chr03_pseudomolecule_IMGAG_V3 24902163-24900988 H
           EGN_Mt090430 20090702
          Length = 257

 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 10/161 (6%)

Query: 84  GTRMTGTLFGHRKTRINLAIQENPXXXXXXXXXXXXXXGKLL-QDMGMGLVRIALECEKR 142
            T +TGT+FG+RK +++  IQ +                 +L ++M  G +RI LE    
Sbjct: 76  STTITGTIFGYRKGKVSFCIQSSSNSTNPILLLELAIPTSVLAKEMRGGTLRIVLESATS 135

Query: 143 --RNEKTKIIEEPIWTMYCNGRKSGYGVKREPTDEDLVVMQILHVISMGAGVIPEDGDHL 200
              N  + +   P+W MYCNGRK GY VKR+P+  DL  + ++  +S+G GVI  +G  +
Sbjct: 136 GSCNNNSNLFSTPLWIMYCNGRKVGYSVKRKPSRSDLEALNLMRSVSVGTGVI--NGKEI 193

Query: 201 ---DGELTYMRAHFERVVGSKDS--ETYYMMNPDGNNGPEL 236
              D +L Y+RA+F+RV GS  S  E++++++P+G+ G EL
Sbjct: 194 CQEDDQLMYLRANFQRVRGSSKSNCESFHLIDPEGSIGQEL 234