Jatropha Genome Database

JcCB0259591.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0259591.20 - phase: 0 
         (445 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g094790.1 Geranylgeranyl reductase, plantal and proka...   619   e-177

>IMGA|Medtr5g094790.1 Geranylgeranyl reductase, plantal and
           prokaryotic chr05_pseudomolecule_IMGAG_V3
           37548583-37550059 E EGN_Mt090430 20090702
          Length = 450

 Score =  619 bits (1595), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 306/447 (68%), Positives = 355/447 (79%), Gaps = 10/447 (2%)

Query: 5   QTQHFKPTFLCPLNTRTNSKRRNVTIVSS------LSGRKLRXXXXXXXXXXXXXXXXXX 58
           + Q F P+F  P  ++      ++TI +S      ++GRKLR                  
Sbjct: 4   KIQTFSPSFSVP-TSKPKQHFHSITISASNSTRPSIAGRKLRAAVIGGGPAGSSAAEALA 62

Query: 59  XXXIETFLFERST-STAKPCGGAIPLCMIDEFSIPLHLIDRHVTRMKIISPSNLTVDFGS 117
              +ETFLFER+  ST KPCGGAIPLCM++EF IP HLIDRHVT+M+I SPSN+ VDFG 
Sbjct: 63  SGGVETFLFERNPPSTPKPCGGAIPLCMLEEFDIPHHLIDRHVTQMRIFSPSNIAVDFG- 121

Query: 118 KTLKPHESIPMLRREVLDSFLRSRAQSNGAQLIPALVTHLEVPSSSTEPYIIHHT-INNT 176
           KTLKP+E I MLRREVLDSFLRSRA S GA+ I  LVT L+VP+S   PY I++T   ++
Sbjct: 122 KTLKPNEFIAMLRREVLDSFLRSRAVSAGAEHISGLVTSLDVPTSPNSPYTINYTNKTSS 181

Query: 177 KQTLAVDVIIGADGANSKVAKSINAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGDDV 236
           K +LAVDV+IGADGANS+VAKSI+AG+YTCAIAFQERI+L DEKM+YY+NLAEMY+GDDV
Sbjct: 182 KNSLAVDVVIGADGANSRVAKSISAGDYTCAIAFQERIKLSDEKMKYYENLAEMYIGDDV 241

Query: 237 SPDFYAWVFPKCDHVAVGTGTVCAKPDIKLYQKGIRERVRQKINGGKVIKVEAHPIPEHP 296
           SPDFYAWVFPKCDHVAVGTGTV +K DIKLYQ+ IRER   KI+GGKVIKVEAHPIPEHP
Sbjct: 242 SPDFYAWVFPKCDHVAVGTGTVRSKHDIKLYQRAIRERAMSKIDGGKVIKVEAHPIPEHP 301

Query: 297 RPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGEKRVKEEDLKRG 356
           RP+RVRGRVALVGDAAGYVTKCSGEGIYFAA SGRMCG  +V+ASEGGEK + E DL R 
Sbjct: 302 RPIRVRGRVALVGDAAGYVTKCSGEGIYFAAMSGRMCGNGVVRASEGGEKMINECDLMRE 361

Query: 357 YLKEWDKKYYSTFRFLDLLQRVFYGSNMAREALVELCGDEYVQRMTFDSYLYKKLANGDR 416
           YLKEWD KY +TFRFLDLLQRVFYGSN +REALVELCGDEYVQRMTFDSYLYKKLA+G  
Sbjct: 362 YLKEWDAKYVNTFRFLDLLQRVFYGSNASREALVELCGDEYVQRMTFDSYLYKKLAHGRV 421

Query: 417 WEDVKMGLNTIGSLVRCRILGREMEAL 443
            +DVK+ +NTIGSL+RC  +G  M+ L
Sbjct: 422 CDDVKLFMNTIGSLIRCNDVGTRMKGL 448