Jatropha Genome Database

JcCB0257561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0257561.10 - phase: 0 
         (163 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g046710.1 2Fe-2S Ferredoxin-like fold chr07_pseudomol...   202   8e-53

>IMGA|Medtr7g046710.1 2Fe-2S Ferredoxin-like fold
           chr07_pseudomolecule_IMGAG_V3 11579752-11580610 F
           EGN_Mt090430 20090702
          Length = 154

 Score =  202 bits (513), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 100/161 (62%), Positives = 124/161 (77%), Gaps = 9/161 (5%)

Query: 1   MAISTLQRLSSQFHRLPSFSPLTKSILVRXXXXXXXXXXXXXXKVADRIVKLFAVDLDGQ 60
           MA+++L++L++   R  + S L++S + R              KV+DRIV+L A+D  GQ
Sbjct: 1   MALASLRKLTTITTRQTTLSYLSQSPICRPTSTQ---------KVSDRIVRLSAIDFQGQ 51

Query: 61  KREVVGLSGQTLLRALANCGLIDPASHRLEEIDACSAECEVSIAQEWLEKLPPRSYDEEY 120
           K  V+GLSGQTLL+AL N GLIDP SHRLE+IDACSA CE++IAQEWL+KLP RSYDEEY
Sbjct: 52  KHNVIGLSGQTLLKALINTGLIDPDSHRLEDIDACSAHCEINIAQEWLDKLPARSYDEEY 111

Query: 121 VLKRNSRARVLNKHARLGCQVVLTPDLKGMVVAIPEPKPWD 161
           VLK NSRARVLN H+RLGCQV+L  DL+GMVVA+PEPKPWD
Sbjct: 112 VLKHNSRARVLNTHSRLGCQVLLNQDLQGMVVALPEPKPWD 152