Jatropha Genome Database

JcCB0254461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0254461.10 + phase: 0 /pseudo/partial
         (163 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g096260.1 Terpene synthase-like; Terpenoid synthase c...    60   5e-10
IMGA|Medtr5g081360.1 Terpene synthase-like; Terpenoid synthase c...    58   3e-09
IMGA|AC235673_20.1 Terpene synthase-like AC235673.1 94085-95298 ...    53   6e-08
IMGA|Medtr8g065800.1 Terpenoid cylases/protein prenyltransferase...    53   6e-08
IMGA|Medtr2g096240.1 Terpene synthase-like; Terpenoid synthase c...    53   7e-08
IMGA|Medtr2g078020.1 Terpene synthase-like chr02_pseudomolecule_...    53   9e-08
IMGA|Medtr6g008950.1 Terpenoid cylases/protein prenyltransferase...    52   1e-07
IMGA|Medtr6g008950.2 Terpenoid cylases/protein prenyltransferase...    52   2e-07
IMGA|Medtr5g081450.1 Terpene synthase-like; Terpenoid synthase c...    50   4e-07

>IMGA|Medtr2g096260.1 Terpene synthase-like; Terpenoid synthase
           chr02_pseudomolecule_IMGAG_V3 22252163-22248799 H
           EGN_Mt090430 20090702
          Length = 572

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 33/144 (22%)

Query: 46  RTLKACSSXQSKTKV-----RPLANFPFTVWGERLGSLHFINRY---------------- 84
           ++L AC+   S         RP+ANF   +WG      H   +Y                
Sbjct: 7   KSLAACAQVDSTQHAVSDFKRPIANFRPCIWG------HLFLKYDSESMEIDDNMMQQVQ 60

Query: 85  ---EKVKNDMLMASTSDSVEKIISIYTLHRLGVSYHFEDEIEENLNKIFNNXPN--FLNE 139
              E+VK  +L++S +D  + +  I +L RLG+SY FE EI+E L +I NN  +   +  
Sbjct: 61  MQKEEVKK-LLLSSRNDMAQILNLIDSLQRLGISYQFEHEIDEALEQIHNNFSDNKEMTS 119

Query: 140 NDYDLYTVAVIFRVFRHHGFKISS 163
            + DL+ +A++FR+ R  G  +SS
Sbjct: 120 EEGDLHFLALVFRLLRQKGHHMSS 143


>IMGA|Medtr5g081360.1 Terpene synthase-like; Terpenoid synthase
           chr05_pseudomolecule_IMGAG_V3 30559952-30563990 E
           EGN_Mt090430 20090702
          Length = 549

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 20/119 (16%)

Query: 61  RPLANFPFTVWGE---RLGS------LHFINRYEKVKN---DMLMASTSDSVEKIISIYT 108
           R +A++  +VWG+   R  S           + E +KN   DML+++T + +EK+  I +
Sbjct: 9   RNVADYKPSVWGDYFLRYASESMEVDQSIAAQIETLKNNVRDMLVSNTKNPLEKVHLIDS 68

Query: 109 LHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDY-----DLYTVAVIFRVFRHHGFKIS 162
           + RLGVSYHFE+EIEE L  I     N++   +      +L ++AV+FR+ R  G  +S
Sbjct: 69  ICRLGVSYHFENEIEEVLQHIHK---NYVQNGEIIIFEDNLCSLAVLFRLLRQQGLHVS 124


>IMGA|AC235673_20.1 Terpene synthase-like AC235673.1 94085-95298 H
           EGN_Mt090430 20090702
          Length = 169

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 91  MLMASTSDSVEKIISIYTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLYTVAVI 150
           M++    + ++++  I  L R+GVSYHF +EI + L+ I+N   + L +N   L+  A+ 
Sbjct: 77  MMLCKIENELDQLEFIDVLQRIGVSYHFNNEIRDILDNIYNKQTSKLKKN---LHATALK 133

Query: 151 FRVFRHHGFKISS 163
           FR+ R HG+ IS+
Sbjct: 134 FRLLRQHGYDIST 146


>IMGA|Medtr8g065800.1 Terpenoid cylases/protein prenyltransferase
           alpha-alpha toroid; Terpenoid synthase
           chr08_pseudomolecule_IMGAG_V3 12505847-12504264 H
           EGN_Mt090430 20090702
          Length = 290

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 5/79 (6%)

Query: 85  EKVKNDMLMASTSDSVEKIISIYTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDL 144
           EKVK  +++    + ++++  I  L R+GVSYHF +EI + L+ I+N   + L +N   L
Sbjct: 91  EKVK--IMLCKIENELDQLEFIDVLQRIGVSYHFNNEIRDILDNIYNKQTSKLKKN---L 145

Query: 145 YTVAVIFRVFRHHGFKISS 163
           +  A+ FR+ R HG+ IS+
Sbjct: 146 HATALKFRLLRQHGYDIST 164


>IMGA|Medtr2g096240.1 Terpene synthase-like; Terpenoid synthase
           chr02_pseudomolecule_IMGAG_V3 22241087-22237175 E
           EGN_Mt090430 20090702
          Length = 552

 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 26/123 (21%)

Query: 61  RPLANFPFTVWGERLGSLHFINRYEKVKNDM--------------LMASTSDSVEKIISI 106
           RP+ +F  ++WG+    L + ++  ++ ++M                +S++D  +K+  I
Sbjct: 14  RPIVDFSPSIWGDVF--LQYDSQPMEINDNMKTQVQMQKEEVRKIFQSSSNDISQKLNFI 71

Query: 107 YTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNEN------DYDLYTVAVIFRVFRHHGFK 160
            +L RLG+SYHFE EI+E L +I  N    L +N      +  L+ +A+ FR+ R  G+ 
Sbjct: 72  DSLQRLGISYHFEREIDEALEQIHKN----LTKNKEITTKEGSLHFLALEFRLLRKKGYH 127

Query: 161 ISS 163
           ISS
Sbjct: 128 ISS 130


>IMGA|Medtr2g078020.1 Terpene synthase-like
           chr02_pseudomolecule_IMGAG_V3 18125640-18126407 H
           EGN_Mt090430 20090702
          Length = 167

 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 15/118 (12%)

Query: 56  SKTKVRPLANFPFTVWG----ERLGSLH------FINRYEKVKNDMLMASTSDSVEKIIS 105
           S+T  R  AN   ++W     + L +L       F+   EKV+  M+     + ++++  
Sbjct: 53  SQTITRRSANSQPSIWTYDYIQSLTNLEVKHTKEFLMLKEKVR--MMFNKMENEIDQLEF 110

Query: 106 IYTLHRLGVSYHFEDEIEENLNKIFNNXPNFLNENDYDLYTVAVIFRVFRHHGFKISS 163
           I  L RLGV+Y F +EI + L+ I+N+  + L  N   LY  ++ FR+ R HG+ IS+
Sbjct: 111 IDVLQRLGVAYQFNNEIGKILDNIYNSQTSMLKNN---LYATSLKFRLLRQHGYNIST 165


>IMGA|Medtr6g008950.1 Terpenoid cylases/protein prenyltransferase
           alpha-alpha toroid; Terpenoid synthase
           chr06_pseudomolecule_IMGAG_V3 1339518-1343067 E
           EGN_Mt090430 20090702
          Length = 557

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 21/131 (16%)

Query: 50  ACSSXQSKTKV-RPLANFPFTVWGERLG-------------SLHFINRYEKVKNDMLMAS 95
           AC S  +K+ + R LA+F   VWG+                S       ++V+N   ++ 
Sbjct: 5   ACFSHDAKSDLQRNLADFHPCVWGDYFIQYDSESVELDQNISAQIDALKKEVRNMFNISK 64

Query: 96  TSDSVEKIISIYTLHRLGVSYHFEDEIEENLNKI----FNNXPNFLNENDYDLYTVAVIF 151
           T    EKI  I ++ RLGVSYH+E+EI+E +  I      N    L +N   L T++V+F
Sbjct: 65  TEKPSEKINLIDSICRLGVSYHYENEIDEVMQYIHKSYVENGEITLQDN---LCTLSVLF 121

Query: 152 RVFRHHGFKIS 162
           R+ R  GF +S
Sbjct: 122 RLLRQQGFHVS 132


>IMGA|Medtr6g008950.2 Terpenoid cylases/protein prenyltransferase
           alpha-alpha toroid; Terpenoid synthase
           chr06_pseudomolecule_IMGAG_V3 1339518-1343067 E
           EGN_Mt090430 20090702
          Length = 379

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 21/131 (16%)

Query: 50  ACSSXQSKTKV-RPLANFPFTVWGERLG-------------SLHFINRYEKVKNDMLMAS 95
           AC S  +K+ + R LA+F   VWG+                S       ++V+N   ++ 
Sbjct: 5   ACFSHDAKSDLQRNLADFHPCVWGDYFIQYDSESVELDQNISAQIDALKKEVRNMFNISK 64

Query: 96  TSDSVEKIISIYTLHRLGVSYHFEDEIEENLNKI----FNNXPNFLNENDYDLYTVAVIF 151
           T    EKI  I ++ RLGVSYH+E+EI+E +  I      N    L +N   L T++V+F
Sbjct: 65  TEKPSEKINLIDSICRLGVSYHYENEIDEVMQYIHKSYVENGEITLQDN---LCTLSVLF 121

Query: 152 RVFRHHGFKIS 162
           R+ R  GF +S
Sbjct: 122 RLLRQQGFHVS 132


>IMGA|Medtr5g081450.1 Terpene synthase-like; Terpenoid synthase
           chr05_pseudomolecule_IMGAG_V3 30599999-30603716 E
           EGN_Mt090430 20090702
          Length = 552

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 23/121 (19%)

Query: 61  RPLANFPFTVWGE---RLGS------LHFINRYEKVKNDMLMASTSDSVEKIISIYTLH- 110
           R +A+F  +VWG+   R  S           + E +KND+       ++EK  S+ T+H 
Sbjct: 11  RNVADFQPSVWGDYFLRYASESMEHDQSIAAQIETLKNDVRKILDIKNIEK--SLATVHL 68

Query: 111 -----RLGVSYHFEDEIEENLNKIFNNXPN----FLNENDYDLYTVAVIFRVFRHHGFKI 161
                RLGVSYHFE EIEE L  I  N        + EN  +L ++AV+FR+ R  G  +
Sbjct: 69  IDSICRLGVSYHFEKEIEEVLQHIHKNYVQNGEIIIFEN--NLCSLAVLFRLLRQQGLHV 126

Query: 162 S 162
           S
Sbjct: 127 S 127