Jatropha Genome Database

JcCB0249501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0249501.10 + phase: 2 /partial
         (139 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g031050.1 Hexokinase chr01_pseudomolecule_IMGAG_V3 74...   174   1e-44
IMGA|Medtr4g159960.1 Hexokinase chr04_pseudomolecule_IMGAG_V3 40...   135   5e-33
IMGA|Medtr8g016060.1 Hexokinase chr08_pseudomolecule_IMGAG_V3 30...   133   3e-32
IMGA|Medtr5g009020.1 Hexokinase chr05_pseudomolecule_IMGAG_V3 18...   113   3e-26
IMGA|Medtr8g102340.1 Hexokinase chr08_pseudomolecule_IMGAG_V3 22...    63   4e-11

>IMGA|Medtr1g031050.1 Hexokinase chr01_pseudomolecule_IMGAG_V3
           7450410-7453329 E EGN_Mt090430 20090702
          Length = 476

 Score =  174 bits (440), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/135 (68%), Positives = 103/135 (76%), Gaps = 16/135 (11%)

Query: 1   TPDLCAMQQDNSDDLQSVGSILCNVLGAESSSSARKIVVEVCDTIVKRGGRLAGAGIVGI 60
           TPDL AMQQDNS DLQ+VGS+L +  G ES+ S RK V+EVCDTIVKRGG LAGAGIVGI
Sbjct: 358 TPDLSAMQQDNSGDLQAVGSLLYDKAGLESNLSERKTVLEVCDTIVKRGGSLAGAGIVGI 417

Query: 61  LQKMEEDSKGLIFGKRTVVAMDGGLYEHYPQYRRYLQEAVTEILGLEISKNIVIEHSKDG 120
           LQKMEEDSKGLIFGKR+VVA+DGG                 E+LG E S N+VIEHSKDG
Sbjct: 418 LQKMEEDSKGLIFGKRSVVAIDGGF----------------ELLGTEKSNNVVIEHSKDG 461

Query: 121 SGIGAALLAATNSKY 135
           SGIG ALLAA+NS Y
Sbjct: 462 SGIGGALLAASNSMY 476


>IMGA|Medtr4g159960.1 Hexokinase chr04_pseudomolecule_IMGAG_V3
           40445427-40441153 E EGN_Mt090430 20090702
          Length = 498

 Score =  135 bits (341), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 66/136 (48%), Positives = 100/136 (73%), Gaps = 1/136 (0%)

Query: 1   TPDLCAMQQDNSDDLQSVGSILCNVLGAESSS-SARKIVVEVCDTIVKRGGRLAGAGIVG 59
           TPD+ +M  D + DL+ VGS L ++L   ++S   RKIVVE+CD +  RG RLA AGI+G
Sbjct: 357 TPDMSSMHHDTTPDLKEVGSKLRDILEISNTSLKMRKIVVELCDIVASRGARLAAAGILG 416

Query: 60  ILQKMEEDSKGLIFGKRTVVAMDGGLYEHYPQYRRYLQEAVTEILGLEISKNIVIEHSKD 119
           IL+K+  D+      +++V+A+DGGL+EHY ++R  L++ + E+LG E ++ +V+EH+ D
Sbjct: 417 ILKKLGRDTVKGGEKQKSVIALDGGLFEHYTKFRVCLEDTLKELLGDEAAETVVVEHAND 476

Query: 120 GSGIGAALLAATNSKY 135
           GSGIGAALLAA++S+Y
Sbjct: 477 GSGIGAALLAASHSQY 492


>IMGA|Medtr8g016060.1 Hexokinase chr08_pseudomolecule_IMGAG_V3
           3005458-3001216 E EGN_Mt090430 20090702
          Length = 494

 Score =  133 bits (334), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 1/136 (0%)

Query: 1   TPDLCAMQQDNSDDLQSVGSILCNVLG-AESSSSARKIVVEVCDTIVKRGGRLAGAGIVG 59
           TPD+ AM  D+S DL  V + L  +L  +++S   RK+VV +C+ +  RG RL+ AGIVG
Sbjct: 356 TPDMSAMHHDSSADLNVVKTKLKEILEISDTSLEVRKVVVALCNIVATRGARLSAAGIVG 415

Query: 60  ILQKMEEDSKGLIFGKRTVVAMDGGLYEHYPQYRRYLQEAVTEILGLEISKNIVIEHSKD 119
           IL+K+ +D+     G++ V+AMDGGLYEHY +YR+ L+  + E+LG  +S ++++EHS D
Sbjct: 416 ILKKLGKDTITNGEGQKNVIAMDGGLYEHYTEYRKCLENTLKELLGEGVSDSVIVEHSND 475

Query: 120 GSGIGAALLAATNSKY 135
           GSG GAALLAA++S Y
Sbjct: 476 GSGTGAALLAASHSFY 491


>IMGA|Medtr5g009020.1 Hexokinase chr05_pseudomolecule_IMGAG_V3
           1864721-1869886 E EGN_Mt090430 20090702
          Length = 496

 Score =  113 bits (283), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/143 (49%), Positives = 94/143 (65%), Gaps = 10/143 (6%)

Query: 1   TPDLCAMQQDNSDDLQSVGSILCNVLG-AESSSSARKIVVEVCDTIVKRGGRLAGAGIVG 59
           TP + AM +D+S DL  V  IL +     +    ARKIVV+VCD + +R  RLA AGIVG
Sbjct: 354 TPLMAAMHEDDSPDLIEVARILNDTFEIPDLPLKARKIVVKVCDVVTRRAARLAAAGIVG 413

Query: 60  ILQKMEEDSKGLIFG---------KRTVVAMDGGLYEHYPQYRRYLQEAVTEILGLEISK 110
           IL+K+  D  G I G         KRTVVA++GGLY  Y  +R YL EA+ EILG +I+K
Sbjct: 414 ILKKIGRDGSGGITGGRSRSDIKMKRTVVAIEGGLYSSYTLFREYLHEALNEILGEDIAK 473

Query: 111 NIVIEHSKDGSGIGAALLAATNS 133
           ++++  ++DGSGIGAALLAA+ S
Sbjct: 474 HVILNVTEDGSGIGAALLAASYS 496


>IMGA|Medtr8g102340.1 Hexokinase chr08_pseudomolecule_IMGAG_V3
           22440454-22437695 H EGN_Mt090430 20090702
          Length = 406

 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 39/129 (30%)

Query: 1   TPDLCAMQQDNSDDLQSVGSILCNVLGAESSSSARKIVVEVCDTIVKRGGRLAGAGIVGI 60
           +PD+ AM QD S+D                    R++V E  + +   G           
Sbjct: 264 SPDMAAMHQDKSED--------------------REVVSEKLNEVFASGW---------- 293

Query: 61  LQKMEEDSKGLIFGKRTVVAMDGGLYEHYPQYRRYLQEAVTEILGLEISKNIVIEHSKDG 120
                      I  ++++V ++  LYEHY  +R YL  +V E+LG ++S N++IEHS  G
Sbjct: 294 ---------NCINNRKSMVTVEIELYEHYRIFRNYLHSSVWEMLGNDLSDNVIIEHSHGG 344

Query: 121 SGIGAALLA 129
           SG GA  LA
Sbjct: 345 SGSGALFLA 353