Jatropha Genome Database

JcCB0245051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0245051.10 - phase: 0 /partial
         (73 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g157910.2 Phosphoglucomutase/phosphomannomutase alpha...   130   1e-31
IMGA|Medtr4g157910.1 Phosphoglucomutase/phosphomannomutase alpha...   130   1e-31
IMGA|Medtr1g129920.1 Phosphoglucomutase/phosphomannomutase alpha...    90   2e-19
IMGA|Medtr1g129920.2 Phosphoglucomutase/phosphomannomutase alpha...    88   1e-18

>IMGA|Medtr4g157910.2 Phosphoglucomutase/phosphomannomutase
          alpha/beta/alpha domain II
          chr04_pseudomolecule_IMGAG_V3 39476799-39469380 E
          EGN_Mt090430 20090702
          Length = 582

 Score =  130 bits (328), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/73 (84%), Positives = 68/73 (93%)

Query: 1  MVVFKVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVV 60
          MV+F VSR+ETTPFDGQKPGTSGLRKKVKVFVQ +YL NFVQA+FNALT EKVRGATLVV
Sbjct: 1  MVLFNVSRIETTPFDGQKPGTSGLRKKVKVFVQTHYLENFVQASFNALTEEKVRGATLVV 60

Query: 61 SGDGRYFSKDAIQ 73
          SGDGRY+S+ AIQ
Sbjct: 61 SGDGRYYSEQAIQ 73


>IMGA|Medtr4g157910.1 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain I; chr04_pseudomolecule_IMGAG_V3
           39477315-39469380 E EGN_Mt090430 20090702
          Length = 638

 Score =  130 bits (328), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/73 (84%), Positives = 68/73 (93%)

Query: 1   MVVFKVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVV 60
           MV+F VSR+ETTPFDGQKPGTSGLRKKVKVFVQ +YL NFVQA+FNALT EKVRGATLVV
Sbjct: 57  MVLFNVSRIETTPFDGQKPGTSGLRKKVKVFVQTHYLENFVQASFNALTEEKVRGATLVV 116

Query: 61  SGDGRYFSKDAIQ 73
           SGDGRY+S+ AIQ
Sbjct: 117 SGDGRYYSEQAIQ 129


>IMGA|Medtr1g129920.1 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain II chr01_pseudomolecule_IMGAG_V3
           29112700-29119131 E EGN_Mt090430 20090702
          Length = 625

 Score = 90.1 bits (222), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 53/70 (75%)

Query: 4   FKVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVVSGD 63
           FK++ + T P +GQK GTSGLRKKVKVF+Q NYL N++QA FN+L  E  +   LV+ GD
Sbjct: 75  FKINSIPTKPIEGQKTGTSGLRKKVKVFMQENYLANWIQALFNSLPPEDYKNGVLVLGGD 134

Query: 64  GRYFSKDAIQ 73
           GRYF+++A Q
Sbjct: 135 GRYFNREATQ 144


>IMGA|Medtr1g129920.2 Phosphoglucomutase/phosphomannomutase
           alpha/beta/alpha domain II chr01_pseudomolecule_IMGAG_V3
           29112700-29119131 E EGN_Mt090430 20090702
          Length = 622

 Score = 87.8 bits (216), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 52/69 (75%)

Query: 5   KVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVVSGDG 64
           K++ + T P +GQK GTSGLRKKVKVF+Q NYL N++QA FN+L  E  +   LV+ GDG
Sbjct: 73  KINSIPTKPIEGQKTGTSGLRKKVKVFMQENYLANWIQALFNSLPPEDYKNGVLVLGGDG 132

Query: 65  RYFSKDAIQ 73
           RYF+++A Q
Sbjct: 133 RYFNREATQ 141