Jatropha Genome Database

JcCB0244361.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0244361.30 + phase: 2 /pseudo/partial
         (103 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g118410.1 Strictosidine synthase; TolB, C-terminal ch...   164   1e-41
IMGA|Medtr2g104630.1 Strictosidine synthase; TolB, C-terminal ch...   111   9e-26
IMGA|Medtr5g099310.1 Strictosidine synthase; TolB, C-terminal ch...    99   6e-22
IMGA|Medtr7g107350.1 Strictosidine synthase; TolB, C-terminal ch...    83   3e-17
IMGA|Medtr7g107340.1 Strictosidine synthase; TolB, C-terminal ch...    80   2e-16
IMGA|Medtr8g115480.1 Strictosidine synthase; TolB, C-terminal ch...    74   1e-14
IMGA|Medtr8g115470.1 Strictosidine synthase; TolB, C-terminal ch...    69   4e-13
IMGA|Medtr2g073880.1 Strictosidine synthase; TolB, C-terminal ch...    68   1e-12
IMGA|Medtr8g115450.1 Strictosidine synthase; TolB, C-terminal ch...    66   4e-12
IMGA|Medtr8g115490.1 Strictosidine synthase; TolB, C-terminal ch...    65   9e-12
IMGA|Medtr2g073840.1 Strictosidine synthase; TolB, C-terminal ch...    64   2e-11
IMGA|Medtr2g073870.1 Strictosidine synthase chr02_pseudomolecule...    62   5e-11
IMGA|Medtr8g088630.1 Strictosidine synthase; TolB, C-terminal ch...    47   2e-06
IMGA|Medtr8g088510.1 Strictosidine synthase; TolB, C-terminal ch...    47   3e-06
IMGA|Medtr8g088660.1 Strictosidine synthase; TolB, C-terminal ch...    46   4e-06

>IMGA|Medtr2g118410.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 28181862-28183878 H
           EGN_Mt090430 20090702
          Length = 407

 Score =  164 bits (415), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 74/95 (77%), Positives = 85/95 (89%)

Query: 1   SEKLCSRGVDSTTSKQWKYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPL 60
           +EK C RG DSTT KQWK+E+ CGRPLGLRFDK++G+LYIADAYYGL++VGP GGLA PL
Sbjct: 125 TEKTCMRGNDSTTPKQWKHEKTCGRPLGLRFDKESGDLYIADAYYGLLMVGPNGGLATPL 184

Query: 61  ATHAGGKPILFANDLDLHENGSIFFTDTSKRYDRV 95
           ATH  GKPILFANDLD+H+NGSIFFTDTS RY+RV
Sbjct: 185 ATHVEGKPILFANDLDIHKNGSIFFTDTSTRYNRV 219


>IMGA|Medtr2g104630.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 24725955-24723932 E
           EGN_Mt090430 20090702
          Length = 393

 Score =  111 bits (277), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 51/92 (55%), Positives = 66/92 (71%)

Query: 3   KLCSRGVDSTTSKQWKYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLAT 62
           +LC+    +T     + E +CGRPLGLRFDKKTG+LYIADAY+GLM VGP+GG A  LAT
Sbjct: 112 ELCNLKASATPLSYVETEDICGRPLGLRFDKKTGDLYIADAYFGLMKVGPQGGFATSLAT 171

Query: 63  HAGGKPILFANDLDLHENGSIFFTDTSKRYDR 94
            A G P  F ND+D+   G+++FTD+S +Y R
Sbjct: 172 EAEGVPFRFTNDVDIDTEGNVYFTDSSTKYQR 203


>IMGA|Medtr5g099310.1 Strictosidine synthase; TolB, C-terminal
          chr05_pseudomolecule_IMGAG_V3 39700643-39702536 E
          EGN_Mt090430 20090702
          Length = 236

 Score = 99.0 bits (245), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 48/78 (61%), Positives = 57/78 (73%), Gaps = 1/78 (1%)

Query: 18 KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
          + E +CGRPLGLRFDKK G+LYI DAY GL VVGP GGLA  LAT A G+P  F ND+D+
Sbjct: 13 ELEHICGRPLGLRFDKKNGDLYIVDAYLGLNVVGPAGGLATQLATEAEGQPFRFNNDMDI 72

Query: 78 HENGS-IFFTDTSKRYDR 94
           E+   I+FTD+S  Y R
Sbjct: 73 SEDEDVIYFTDSSTVYQR 90


>IMGA|Medtr7g107350.1 Strictosidine synthase; TolB, C-terminal
           chr07_pseudomolecule_IMGAG_V3 25077509-25079718 E
           EGN_Mt090430 20090702
          Length = 394

 Score = 83.2 bits (204), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 57/79 (72%), Gaps = 2/79 (2%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHA-GGKPILFANDLD 76
           K E +CGRPLGL F+  +G LY+ADAY GL+V+ P GG+A  + +HA  G+P+ F N LD
Sbjct: 119 KKEHICGRPLGLCFNVASGQLYVADAYMGLVVIEPTGGIARKVISHAVEGQPLAFTNSLD 178

Query: 77  LHE-NGSIFFTDTSKRYDR 94
           + +  G+++FT +S +Y+R
Sbjct: 179 IDQRTGAVYFTSSSSKYER 197


>IMGA|Medtr7g107340.1 Strictosidine synthase; TolB, C-terminal
           chr07_pseudomolecule_IMGAG_V3 25071831-25076445 E
           EGN_Mt090430 20090702
          Length = 378

 Score = 80.1 bits (196), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 56/79 (70%), Gaps = 2/79 (2%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHA-GGKPILFANDLD 76
           K E +CGRPLGL F+  +G LY+ADAY GL+V+   GG+A  + +HA  G+P+ F N LD
Sbjct: 103 KKEHICGRPLGLCFNVASGQLYVADAYMGLVVIESTGGIARKVISHAVEGQPLAFTNSLD 162

Query: 77  LHE-NGSIFFTDTSKRYDR 94
           + +  G+++FT +S +Y+R
Sbjct: 163 IDQRTGAVYFTSSSSKYER 181


>IMGA|Medtr8g115480.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 25956446-25957889 E
           EGN_Mt090430 20090702
          Length = 326

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 1/74 (1%)

Query: 20  ERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLHE 79
           + +CGRPLGL F+ +TG+LY AD YYGL+ VGP GG A  L   A     +FAN LD+  
Sbjct: 95  QAICGRPLGLGFNHQTGDLYAADGYYGLVKVGPNGGKATQLVGPAQSNSTVFANGLDVDS 154

Query: 80  N-GSIFFTDTSKRY 92
           N G ++FT  S ++
Sbjct: 155 NTGIVYFTIASTKF 168


>IMGA|Medtr8g115470.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 25947451-25949146 E
           EGN_Mt090430 20090702
          Length = 335

 Score = 69.3 bits (168), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 20  ERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLH- 78
           + +CGRPLGL F+ +T +LY+ADAY+GL+ VGP GG A  L         +FA+ LD+  
Sbjct: 95  QAICGRPLGLGFNHQTNDLYVADAYFGLVKVGPNGGNATQLVGPTQANSTMFADGLDVDP 154

Query: 79  ENGSIFFTDTSKRY 92
           + G ++FT  S  Y
Sbjct: 155 DTGIVYFTIASTNY 168


>IMGA|Medtr2g073880.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 16753518-16752151 E
           EGN_Mt090430 20090702
          Length = 336

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 2/77 (2%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPL-ATHAGGKPILFANDLD 76
           + +  CGRP+GL FD  TG LYIADAYYGL+ V  +GG A  L A +  G P  F   +D
Sbjct: 95  ELQETCGRPMGLSFDYNTGELYIADAYYGLVKVPYDGGAATQLVANNLQGNPFGFLAGVD 154

Query: 77  LH-ENGSIFFTDTSKRY 92
           +    G ++FT+ S RY
Sbjct: 155 VDPSTGIVYFTEASSRY 171


>IMGA|Medtr8g115450.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 25940727-25942096 E
           EGN_Mt090430 20090702
          Length = 333

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 20  ERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLH- 78
           +  CGRPLGL F+ +TG+LY+ADAY GL+ V P+GG    L   A     +FA+ LD+  
Sbjct: 93  QATCGRPLGLGFNHQTGDLYVADAYLGLVKVSPDGGNVTQLVGPAQANSTMFADGLDVDP 152

Query: 79  ENGSIFFTDTSKRY 92
           + G ++FT  S  +
Sbjct: 153 DTGIVYFTVASTNF 166


>IMGA|Medtr8g115490.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 25962588-25963698 E
           EGN_Mt090430 20090702
          Length = 184

 Score = 65.1 bits (157), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)

Query: 20  ERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLHE 79
           +  CGRPLGL F+ +T +LY+ADAY+GL+ VGP GG A  L         + A+ LD+  
Sbjct: 99  QPTCGRPLGLGFNHQTNDLYVADAYFGLVKVGPNGGNATQLVGPTQANSTVSADGLDVDP 158

Query: 80  N-GSIFFTDTSKRYD 93
           N G I+FT  S ++ 
Sbjct: 159 NTGIIYFTIASTKFQ 173


>IMGA|Medtr2g073840.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 16742189-16740433 E
           EGN_Mt090430 20090702
          Length = 333

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 20  ERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLHE 79
           +  CGRP+GL F+ KT  LYIADAYYGL+ V  +GG A  L ++  G P  F    D+  
Sbjct: 94  QETCGRPMGLSFNYKTKELYIADAYYGLVKVPYDGGAATQLVSNVLGNPFGFLAGADVDP 153

Query: 80  N-GSIFFTDTS 89
           N G ++FT+ S
Sbjct: 154 NTGIVYFTEAS 164


>IMGA|Medtr2g073870.1 Strictosidine synthase
           chr02_pseudomolecule_IMGAG_V3 16749408-16748504 E
           EGN_Mt090430 20090702
          Length = 130

 Score = 62.4 bits (150), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 44/76 (57%)

Query: 20  ERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLHE 79
           + +CGRP+GL  D KT  LYIADAYYGL+ V  +GG A  L ++  G P  F   +D+  
Sbjct: 54  QEICGRPMGLSSDYKTRELYIADAYYGLVKVSYDGGAATQLVSNILGNPFGFLAGVDVDP 113

Query: 80  NGSIFFTDTSKRYDRV 95
           N  I +   +  Y ++
Sbjct: 114 NTGIVYFMEASYYHKI 129


>IMGA|Medtr8g088630.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 18812317-18808704 E
           EGN_Mt090430 20090702
          Length = 375

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 24  GRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLHENGSI 83
           GRPLGL FD   G L IADA  GL+ V  E  + + L T   G      + +D+  +G+I
Sbjct: 118 GRPLGLAFDGN-GQLIIADADKGLLRVTREKEIEV-LVTEIDGLKFKLTDGVDVAHDGTI 175

Query: 84  FFTDTSKRY 92
           +FTD S +Y
Sbjct: 176 YFTDASSKY 184


>IMGA|Medtr8g088510.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 18777233-18774677 E
           EGN_Mt090430 20090702
          Length = 375

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 24  GRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDLHENGSI 83
           GRPLGL FD   G L IADA  GL+ V  E  + + L T   G      + +D+  +G+I
Sbjct: 118 GRPLGLAFDGN-GQLIIADADKGLLRVTREKEIEV-LVTEIDGLQFKLTDGVDVAHDGTI 175

Query: 84  FFTDTSKRY 92
           +FTD S +Y
Sbjct: 176 YFTDASSKY 184


>IMGA|Medtr8g088660.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 18828285-18826467 H
           EGN_Mt090430 20090702
          Length = 197

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 9   VDSTTSKQWKYERVCGRPLGLRFDKKTGNLYIADAYYGLMVV----GPEGGLAIPLATHA 64
           V  +  + W +    GRPLGL  +K TG L +ADA+ GL+ V    G E  + I LA   
Sbjct: 57  VADSVVENWVHSS--GRPLGLALEK-TGELIVADAHLGLLRVTQKEGKEPKVEI-LANEH 112

Query: 65  GGKPILFANDLDLHENGSIFFTDTSKRYD 93
            G      + +D+ E+G+I+FT+ + +Y+
Sbjct: 113 DGLKFKLTDGVDVGEDGTIYFTEATYKYN 141