Jatropha Genome Database

JcCB0244361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0244361.10 + phase: 0 /partial
         (124 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g118410.1 Strictosidine synthase; TolB, C-terminal ch...   163   3e-41
IMGA|Medtr2g104630.1 Strictosidine synthase; TolB, C-terminal ch...    68   1e-12
IMGA|Medtr5g099300.1 Strictosidine synthase chr05_pseudomolecule...    59   7e-10
IMGA|Medtr8g115450.1 Strictosidine synthase; TolB, C-terminal ch...    52   5e-08
IMGA|Medtr7g107340.1 Strictosidine synthase; TolB, C-terminal ch...    52   7e-08
IMGA|Medtr7g107350.1 Strictosidine synthase; TolB, C-terminal ch...    49   5e-07
IMGA|Medtr5g085410.1 Strictosidine synthase chr05_pseudomolecule...    48   1e-06
IMGA|Medtr2g073840.1 Strictosidine synthase; TolB, C-terminal ch...    47   3e-06

>IMGA|Medtr2g118410.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 28181862-28183878 H
           EGN_Mt090430 20090702
          Length = 407

 Score =  163 bits (412), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/125 (65%), Positives = 92/125 (73%), Gaps = 3/125 (2%)

Query: 1   MEKKTFFLHRDGIFLQNPXXXXXXXXXXXXXMDPFKMGPLGRHDFRPVKHEVAPYKKVMG 60
           MEKK F   +D  FLQ               MDPF +GPLG H+FRPVKH VAPYK+VM 
Sbjct: 1   MEKKNFL--KDETFLQQHKVLAIFLFLSFVLMDPFHLGPLGEHEFRPVKHNVAPYKQVMK 58

Query: 61  SWPRDEKGRLG-NGKLEFVNEVFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFA 119
           +WP+D   RLG +GKLEF NEVFGPESLEFD +G GPYTGLADGRVVRWMGE +GWETFA
Sbjct: 59  NWPKDNMSRLGLHGKLEFENEVFGPESLEFDNMGRGPYTGLADGRVVRWMGEQLGWETFA 118

Query: 120 VVTTN 124
           VVT+N
Sbjct: 119 VVTSN 123


>IMGA|Medtr2g104630.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 24725955-24723932 E
           EGN_Mt090430 20090702
          Length = 393

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 5/94 (5%)

Query: 32  MDPFKMGPL-GRHDFRPVKHEVAPYKKVMGSWPRDEKGRLGNGKLEFVNEVFGPESLEFD 90
           +DPFK  P+ G  DF   K  +  + +V      D+   L   +L FVN+V GPES+ FD
Sbjct: 20  LDPFKQSPIQGFPDFEVHKINLPSWSEV--PLDHDKDNLLLKSELMFVNQVQGPESIAFD 77

Query: 91  AIGNGPYTGLADGRVVRWMGEDVGWETFAVVTTN 124
           + G GPYTG+ADGR++ W G  + W  FA  + N
Sbjct: 78  SHGRGPYTGVADGRILFWNG--LSWIDFAYTSPN 109


>IMGA|Medtr5g099300.1 Strictosidine synthase
           chr05_pseudomolecule_IMGAG_V3 39697344-39698076 F
           EGN_Mt090430 20090702
          Length = 90

 Score = 58.5 bits (140), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 38/59 (64%)

Query: 66  EKGRLGNGKLEFVNEVFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVTTN 124
            K  L   +L  V    GPESL FD+   GPYTG+ADGR++++ GE+ GW  FAV ++N
Sbjct: 31  SKDGLQADRLLHVTGAVGPESLVFDSHDEGPYTGVADGRILKYEGEERGWTEFAVTSSN 89


>IMGA|Medtr8g115450.1 Strictosidine synthase; TolB, C-terminal
           chr08_pseudomolecule_IMGAG_V3 25940727-25942096 E
           EGN_Mt090430 20090702
          Length = 333

 Score = 52.4 bits (124), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%)

Query: 74  KLEFVNEVFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVTTN 124
           KL+  + V GPESL FD  G GPY G +DGR+ ++ G DVG++ +A  + N
Sbjct: 27  KLQLPSPVTGPESLAFDKNGEGPYVGSSDGRIFKYNGPDVGFKEYAYTSPN 77


>IMGA|Medtr7g107340.1 Strictosidine synthase; TolB, C-terminal
           chr07_pseudomolecule_IMGAG_V3 25071831-25076445 E
           EGN_Mt090430 20090702
          Length = 378

 Score = 52.0 bits (123), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 31/46 (67%)

Query: 79  NEVFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVTTN 124
           N+  GPESL FD  G GPYTG+++G +++W   +  W  FAV +++
Sbjct: 39  NDAVGPESLAFDPNGEGPYTGISNGHIIKWHRHENRWVDFAVTSSS 84


>IMGA|Medtr7g107350.1 Strictosidine synthase; TolB, C-terminal
           chr07_pseudomolecule_IMGAG_V3 25077509-25079718 E
           EGN_Mt090430 20090702
          Length = 394

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 29/50 (58%)

Query: 74  KLEFVNEVFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVTT 123
           KL       GPES  FD  G GPYTG++DG +++W      WE FAV ++
Sbjct: 49  KLPIEYGAVGPESFAFDPHGEGPYTGVSDGHIIKWHHHQNRWEDFAVTSS 98


>IMGA|Medtr5g085410.1 Strictosidine synthase
           chr05_pseudomolecule_IMGAG_V3 32629227-32629795 H
           EGN_Mt090430 20090702
          Length = 145

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query: 74  KLEFVNEVFGPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVTTN 124
           KL   + V GPESL FD  G GPY G +DGR+ +++G + G++ +A  + N
Sbjct: 25  KLRLPSPVTGPESLAFDRNGGGPYVGSSDGRIFKYIGPNEGFKEYAFTSPN 75


>IMGA|Medtr2g073840.1 Strictosidine synthase; TolB, C-terminal
           chr02_pseudomolecule_IMGAG_V3 16742189-16740433 E
           EGN_Mt090430 20090702
          Length = 333

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 30/40 (75%)

Query: 83  GPESLEFDAIGNGPYTGLADGRVVRWMGEDVGWETFAVVT 122
           GPESL FD+IG GPYTG++DGR++++  E   +  FA ++
Sbjct: 37  GPESLAFDSIGGGPYTGVSDGRILKYDEECSCFLEFAHIS 76