Jatropha Genome Database

JcCB0238051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0238051.10 - phase: 1 /partial
         (181 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g006030.1 lipase-related, putative chr08_pseudomolecu...   145   8e-36
IMGA|Medtr4g159550.1 lipase-related, putative chr04_pseudomolecu...    83   6e-17

>IMGA|Medtr8g006030.1 lipase-related, putative
           chr08_pseudomolecule_IMGAG_V3 548750-541816 H
           EGN_Mt090430 20090702
          Length = 511

 Score =  145 bits (367), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 90/159 (56%), Positives = 111/159 (69%), Gaps = 10/159 (6%)

Query: 1   EHSPRHSGNS-THAQELVTFSSAQTEEFPDGDCASSRQNH--STFPEPSTSIKPSTSATA 57
           E SPR SG S   AQE +TFSSA+TE     D      NH  S     ++    STS +A
Sbjct: 70  ERSPRESGASDIRAQEHMTFSSAETEASSSTDT-----NHICSNINNLTSVESSSTSTSA 124

Query: 58  APSI--QITRTSSDGPSQNNSAIVPSSHSGQNGISIFQGLIERARRTVRGSADDIGWMQR 115
           A  I  + TR S+  P  N+S +V ++++GQ GISIF+ LI+RARRTVRGSADDIGW+Q 
Sbjct: 125 ALRIYDENTRISTRDPLLNSSTLVATNNTGQGGISIFRSLIDRARRTVRGSADDIGWLQH 184

Query: 116 ASGMPPVEDGTGRFMEVLDNIRHGLHKLPNSMVYLLVPG 154
           A GMPPVEDGT RF E+LDNI+HG+HKLPNS+VYLL+PG
Sbjct: 185 AQGMPPVEDGTERFQEILDNIKHGVHKLPNSVVYLLIPG 223


>IMGA|Medtr4g159550.1 lipase-related, putative
           chr04_pseudomolecule_IMGAG_V3 40266689-40269172 E
           EGN_Mt090430 20090702
          Length = 371

 Score = 83.2 bits (204), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 46/57 (80%)

Query: 98  RARRTVRGSADDIGWMQRASGMPPVEDGTGRFMEVLDNIRHGLHKLPNSMVYLLVPG 154
           R  +T+RGS+DDIGW+Q A GMPPV DG+ RF+E+L +IR+G   +P+S VYLL+PG
Sbjct: 149 RVLKTLRGSSDDIGWLQHAPGMPPVHDGSSRFLELLSDIRNGKDSIPSSFVYLLIPG 205