Jatropha Genome Database

JcCB0237641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0237641.10 - phase: 0 
         (371 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g093730.1 Terpenoid synthase chr08_pseudomolecule_IMG...   506   e-143
IMGA|Medtr5g019360.1 Polyprenyl synthetase chr05_pseudomolecule_...   446   e-126
IMGA|AC146550_1.1 Polyprenyl synthetase AC146550.40 4-1850 E EGN...   194   8e-50
IMGA|Medtr5g100210.1 Polyprenyl synthetase chr05_pseudomolecule_...    95   5e-20

>IMGA|Medtr8g093730.1 Terpenoid synthase
           chr08_pseudomolecule_IMGAG_V3 20719069-20720655 E
           EGN_Mt090430 20090702
          Length = 372

 Score =  506 bits (1302), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 257/376 (68%), Positives = 301/376 (80%), Gaps = 9/376 (2%)

Query: 1   MTSVNLGSWFHSCCVLNQATRSRSNSKSFSLPFNPLKRLSIPLFYENSKRPSSSISA--- 57
           M++VNL +W HS  + NQ T + +      +P     ++ I +      +P+SS  +   
Sbjct: 1   MSAVNLNTWTHSNFMCNQVTTTATTRSRSRIPSFYFTKIPISVSPIKPSKPNSSSFSFSV 60

Query: 58  --IITREEETLQDEQNNGSTPPFDFKSYMRQKAASINQALEAAVSVREPAKIHESMRYSL 115
             ++T++E    +EQN    P F+FKSYM +KA  +N+AL+ AVS+REP K+HE+MRYSL
Sbjct: 61  SSLLTKQEPIEAEEQN----PIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSL 116

Query: 116 LAGGKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPT 175
           LAGGKRVRP LCLAACELVGG E MAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPT
Sbjct: 117 LAGGKRVRPVLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPT 176

Query: 176 NHIVFGENVAVLAGDALLAFAFEHIAVSTLNVPPARVVRAIGELAKAIGAEGLVAGQVVD 235
           NH VFGE+VAVLAGDALLAFAFEHIAVST++V PAR+VRAIGELAK+IG+EGLVAGQVVD
Sbjct: 177 NHKVFGEDVAVLAGDALLAFAFEHIAVSTVDVSPARIVRAIGELAKSIGSEGLVAGQVVD 236

Query: 236 ICSEGLSEVDLEKLEFIHVHKTAKXXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLLFQV 295
           I SEGLS+V LE+LEFIH+HKTA                +DE+VEKLRK+A  IGLLFQV
Sbjct: 237 INSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQV 296

Query: 296 VDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAQKLNKEAQEQLAGFDHEK 355
           VDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKS+EFA+KLN++AQEQL+GFD  K
Sbjct: 297 VDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNK 356

Query: 356 AAPLIALANYIAYRQN 371
           +APLIALANYIAYRQN
Sbjct: 357 SAPLIALANYIAYRQN 372


>IMGA|Medtr5g019360.1 Polyprenyl synthetase
           chr05_pseudomolecule_IMGAG_V3 7203707-7202564 E
           EGN_Mt090430 20090702
          Length = 371

 Score =  446 bits (1147), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/346 (64%), Positives = 268/346 (77%), Gaps = 14/346 (4%)

Query: 39  LSIPLFYENSKR----------PSSSISAIITREEETLQDEQNNGSTPP---FDFKSYMR 85
           L+IP+F   +++          PS  +SA++T     ++D++    T P   F+F  YM 
Sbjct: 27  LAIPIFSSTNQQQTRNKLVSSFPSLKLSAVLTNTN-IVKDKKTEEETIPNFNFNFNGYML 85

Query: 86  QKAASINQALEAAVSVREPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAMPAA 145
           +KA  +N+AL+ A+ ++EP KI+E+MRYSLLAGGKRVRP LC+AAC LVGG E  ++P+A
Sbjct: 86  EKANIVNKALDEAIVLQEPEKIYEAMRYSLLAGGKRVRPVLCIAACGLVGGKEEASIPSA 145

Query: 146 CAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVSTL 205
           CAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNH V+GE+VAVLAGDALL+FAFEH+AVST+
Sbjct: 146 CAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHVAVSTI 205

Query: 206 NVPPARVVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEFIHVHKTAKXXXXXX 265
            VPP R+VRAI ELAKA+G EGLVAGQ+VD+ SEG S V LE LEFIH+ KTA       
Sbjct: 206 GVPPERIVRAIAELAKAVGKEGLVAGQIVDLESEGKSNVGLETLEFIHLRKTAALLEAAV 265

Query: 266 XXXXXXXXXTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYP 325
                    T++E+EKLRK+AR IGLLFQVVDDILDVTKSS+ELGKTAGKDL ADK TYP
Sbjct: 266 VMGAIVGGGTEDEIEKLRKFARYIGLLFQVVDDILDVTKSSEELGKTAGKDLTADKATYP 325

Query: 326 KLLGIEKSREFAQKLNKEAQEQLAGFDHEKAAPLIALANYIAYRQN 371
           KLLG+EKS+EFA KL K+A + L GFD EKAAPL+AL NYIAYRQN
Sbjct: 326 KLLGLEKSKEFADKLIKDAHDCLIGFDVEKAAPLVALTNYIAYRQN 371


>IMGA|AC146550_1.1 Polyprenyl synthetase AC146550.40 4-1850 E
           EGN_Mt090430 20090702
          Length = 262

 Score =  194 bits (492), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 106/260 (40%), Positives = 155/260 (59%), Gaps = 16/260 (6%)

Query: 111 MRYSLLA-GGKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDL 169
           MRYS LA G KR  P +C++ACEL GG+   A P ACA+EM+H  SLIHDDLPCMD+   
Sbjct: 1   MRYSALAKGAKRSPPVMCISACELFGGSRLAAFPTACALEMVHAASLIHDDLPCMDDSLS 60

Query: 170 RRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVSTLN--VPPARVVRAIGELAKAIGAEG 227
           RRG+P+NH ++G ++A+LAGDAL    F+HI   T +  VP  RV+R I E+A+ +G+ G
Sbjct: 61  RRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLVPEPRVLRVIAEIARCVGSTG 120

Query: 228 LVAGQVVDICSEGLSEVDLEKLEFIHVHKTAKXXXXXXXXXXXXXXXTDEEVEKLRKYAR 287
           + AGQ +D+   G + V L     I   K  +                D+E+E+LR+Y R
Sbjct: 121 MAAGQFLDL-KGGPNAVGL-----IQDKKFGEMAECSAVCGGLLAGAEDDEIERLRRYGR 174

Query: 288 DIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAQKLNKEAQEQ 347
            +G+L+ +VDDIL+     + L     KD      +Y ++ G+EK+ E A++L  +A E+
Sbjct: 175 AVGVLYAIVDDILE-----ERLKPEGDKDRENSGKSYVEVYGVEKAAEVAEELRAKALEE 229

Query: 348 LAGFDH--EKAAPLIALANY 365
           L GF+   ++  PL +  NY
Sbjct: 230 LDGFEKYGDQVLPLYSFVNY 249


>IMGA|Medtr5g100210.1 Polyprenyl synthetase
           chr05_pseudomolecule_IMGAG_V3 40103398-40100868 E
           EGN_Mt090430 20090702
          Length = 288

 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 9/214 (4%)

Query: 83  YMRQKAASINQALEAAVSVREPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAM 142
           Y     A I   L+  ++++EP  + E M + +    K   PALCLA CELVGG    A+
Sbjct: 46  YWASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLATCELVGGQRHQAI 105

Query: 143 PAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAV 202
            AA A+ ++   +  H+ LP  D     R +P  + V+G N+ +L GD ++ F FE +A 
Sbjct: 106 SAASALLLMEAATYTHEHLPLTD-----RPRPMINHVYGPNMELLTGDGIVPFGFELLAR 160

Query: 203 STLNVPPARVVRAIGELAKAIGAEGLVA----GQVVDICSEGLSEVDLEKLEFIHVHKTA 258
           S       R+++ + E+++A+G+ G V     G+++   S+G  +  +E++  +      
Sbjct: 161 SDGGENSERILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHVEEIRHVVEKYEG 220

Query: 259 KXXXXXXXXXXXXXXXTDEEVEKLRKYARDIGLL 292
           +                +EE+E+LRK+   +G++
Sbjct: 221 RLHSCGAVCGGVLGGGCEEEIERLRKFGYYVGII 254