Jatropha Genome Database

JcCB0236511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0236511.10 - phase: 0 
         (386 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g015110.1 Branched-chain amino acid aminotransferase ...   497   e-141
IMGA|Medtr4g122070.1 Branched-chain amino acid aminotransferase ...   444   e-125
IMGA|Medtr4g122080.1 Branched-chain amino acid aminotransferase ...   421   e-118
IMGA|Medtr1g099060.1 Aminotransferase, class IV chr01_pseudomole...    60   1e-09
IMGA|Medtr1g099880.1 Aminotransferase, class IV chr01_pseudomole...    53   3e-07

>IMGA|Medtr5g015110.1 Branched-chain amino acid aminotransferase II
           chr05_pseudomolecule_IMGAG_V3 4952162-4959265 F
           EGN_Mt090430 20090702
          Length = 408

 Score =  497 bits (1280), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 234/372 (62%), Positives = 289/372 (77%)

Query: 14  SFRLGFNIQSKFGAYFTFRAASSLQQAYQPSTCSDDEYADLDWDNLGFGLLSTDFMYIMK 73
           S  L    Q  F +    +A+++L+ +   S     E AD+DWDNLGFGL  TD+MY MK
Sbjct: 36  SLSLKLQKQFPFTSQNVLQASNALRPSASVSASEAIELADIDWDNLGFGLQPTDYMYFMK 95

Query: 74  SSKEGNFEQGNLSRYENIPLSPSAGILNYGQGLFEGTKAYRKENGGLLLFRPDLNAIRMN 133
             + G F +G L R+ NI L+PSAG+LNYGQGLFEG KAYRK++G +LLFRP+ NA+RM 
Sbjct: 96  CDQGGTFSKGELKRFGNIELNPSAGVLNYGQGLFEGLKAYRKDDGNILLFRPEENALRMK 155

Query: 134 IGAERMCMPSPSIDQFVNAVKQTAIANKRWVPPPGKGTLYIRPLLMGTGPVLGVAPSPEY 193
            GAERMCMPSPS++QFV AVK T +ANKRW+PP GKG+LYIRPLLMG+G VLG+AP+PEY
Sbjct: 156 TGAERMCMPSPSVEQFVEAVKDTVLANKRWIPPQGKGSLYIRPLLMGSGAVLGLAPAPEY 215

Query: 194 TFLVYASPVGNYFKGGFAPLNLYVDDEYHRASRGGAGGVKAISNYAPVLKAITRAKNRGF 253
           TFL+Y SPVGNYFK G AP+NL V+ E HRA+ GG GGVK I NYA VLKA + AK +G+
Sbjct: 216 TFLIYVSPVGNYFKEGLAPINLIVESELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGY 275

Query: 254 SDVLYLDSVEKKYLEEVSSCNIFIVKGNVISTPATNGTILPGVTRKSIIEIAQDQGYKVE 313
           SDVLYLD V K+YLEEVSSCNIF+VKGNVISTP+  GTILPG+TRKSII++A+ QG++VE
Sbjct: 276 SDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPSIKGTILPGITRKSIIDVARSQGFEVE 335

Query: 314 ERVIPVDELVNADEVFCTGTAVVVAPVGSITYQNKRIEYKTGGGSTSQKLYSTLVGIQTA 373
           ER++ VDEL+ ADEVFCTGTAVVV+PVGSITY  ++  Y  G G+ SQ+LY+ L  +Q  
Sbjct: 336 ERLVAVDELLEADEVFCTGTAVVVSPVGSITYLGEKKSYGDGVGAVSQQLYTGLTRLQMG 395

Query: 374 VIEDKKGWTVEI 385
           + ED   WTVE+
Sbjct: 396 LAEDNMNWTVEL 407


>IMGA|Medtr4g122070.1 Branched-chain amino acid aminotransferase II
           chr04_pseudomolecule_IMGAG_V3 28818131-28814920 E
           EGN_Mt090430 20090702
          Length = 357

 Score =  444 bits (1141), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/340 (63%), Positives = 272/340 (80%), Gaps = 4/340 (1%)

Query: 49  DEYADLDWDNLGFGLLSTDFMYIMKSSKEGNFEQGNLSRYENIPLSPSAGILNYGQGLFE 108
           + YAD++W+ L F L  TD+M++MK +K   F QG+L RY NI +SP+AGI+NYGQG+FE
Sbjct: 20  ENYADINWEGLSFSLTQTDYMHVMKCTKGEKFSQGSLIRYGNIEISPAAGIINYGQGIFE 79

Query: 109 GTKAYRKENGGLLLFRPDLNAIRMNIGAERMCMPSPSIDQFVNAVKQTAIANKRWVPPPG 168
           G KAYR E+G +LLFRP+ NA+RM +GA+R+CMPSPS++QFV+AVKQT +ANKRWVPPPG
Sbjct: 80  GLKAYRTEDGRILLFRPEENALRMKMGADRLCMPSPSVEQFVDAVKQTVLANKRWVPPPG 139

Query: 169 KGTLYIRPLLMGTGPVLGVAPSPEYTFLVYASPVGNYFKGGFAPLNLYVDDEYHR--ASR 226
           KGTLY+RPLLMGTG  LG+APSPEYTFL+Y SPVG Y +GG   LNL V+D++HR  A  
Sbjct: 140 KGTLYLRPLLMGTGAALGLAPSPEYTFLIYCSPVGKYHEGG--RLNLKVEDKFHRSIAGS 197

Query: 227 GGAGGVKAISNYAPVLKAITRAKNRGFSDVLYLDSVEKKYLEEVSSCNIFIVKGNVISTP 286
           GG GG+K+++NYAP+  A+T AK  GFSDVL+LDS   K +EE ++CNIF+VK N I TP
Sbjct: 198 GGTGGIKSVTNYAPIYTAVTEAKANGFSDVLFLDSATGKNIEEATACNIFVVKENDIFTP 257

Query: 287 ATNGTILPGVTRKSIIEIAQDQGYKVEERVIPVDELVNADEVFCTGTAVVVAPVGSITYQ 346
           A +G+ILPGVTRKSII+IA D GYKV ER I V+E+++ADEVFCTGTAVVV  V S+TY+
Sbjct: 258 AIDGSILPGVTRKSIIDIAIDLGYKVIERSISVEEMMSADEVFCTGTAVVVTSVASVTYK 317

Query: 347 NKRIEYKTGGGSTSQKLYSTLVGIQTAVIEDKKGWTVEIE 386
             R EYKTG  + SQKL   LVGIQT  IEDKK WTV+++
Sbjct: 318 ETRAEYKTGAETLSQKLQGILVGIQTGCIEDKKSWTVQVD 357


>IMGA|Medtr4g122080.1 Branched-chain amino acid aminotransferase II
           chr04_pseudomolecule_IMGAG_V3 28828130-28823696 E
           EGN_Mt090430 20090702
          Length = 358

 Score =  421 bits (1082), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 193/337 (57%), Positives = 264/337 (78%), Gaps = 1/337 (0%)

Query: 51  YADLDWDNLGFGLLSTDFMYIMKSSKEGNFEQGNLSRYENIPLSPSAGILNYGQGLFEGT 110
           YA++DWD L  G++ TD+MYI+KS+++  +  G L  +  I ++P + ++NYGQGLFEG 
Sbjct: 22  YANMDWDKLTCGVIPTDYMYIIKSNEDRTYSNGTLVPFGTIDINPHSAVINYGQGLFEGM 81

Query: 111 KAYRKENGGLLLFRPDLNAIRMNIGAERMCMPSPSIDQFVNAVKQTAIANKRWVPPPGKG 170
           KAYR ++G + LFRP+ NA+RM +GAER+ MPSPS++Q+++AVKQ   ANKRWVPP GKG
Sbjct: 82  KAYRTKDGNVQLFRPEENALRMQMGAERLLMPSPSVEQYIDAVKQVVHANKRWVPPWGKG 141

Query: 171 TLYIRPLLMGTGPVLGVAPSPEYTFLVYASPVGNYFKGGFAPLNLYVDDEYHRASRGGAG 230
           TLYIRPLL G+GPVLG+ P+P+ T L++ +P+ N +KG  + LNL +++ + RA  GG G
Sbjct: 142 TLYIRPLLFGSGPVLGIGPAPQCTLLIFTNPISNIYKGQTSALNLLINENFPRAYPGGTG 201

Query: 231 GVKAISNYAPVLKAITRAKNRGFSDVLYLDSVEKKYLEEVSSCNIFIVKGNVISTPATNG 290
           GVK+ISNY  V + +  AK +GFSDVL+LD+VE KY+EEVSSCN FIVKG V+ST  T G
Sbjct: 202 GVKSISNYPLVFQVVKEAKAKGFSDVLFLDAVEHKYIEEVSSCNAFIVKGKVLSTAPTLG 261

Query: 291 TILPGVTRKSIIEIAQDQGYKVEERVIPVDELVNADEVFCTGTAVVVAPVGSITYQNKR- 349
           TILPGVTRKS+IE+A+D GY+V ER + V+EL+ ADEVFCTGTAV ++ VGS+TY+NKR 
Sbjct: 262 TILPGVTRKSVIELARDLGYEVMERKVSVEELLEADEVFCTGTAVGISAVGSVTYKNKRC 321

Query: 350 IEYKTGGGSTSQKLYSTLVGIQTAVIEDKKGWTVEIE 386
           + +KTG  + ++KLY  + GIQT ++EDKKGW V+I+
Sbjct: 322 VTFKTGADTVTKKLYDLITGIQTGLLEDKKGWVVKID 358


>IMGA|Medtr1g099060.1 Aminotransferase, class IV
           chr01_pseudomolecule_IMGAG_V3 20138113-20145998 E
           EGN_Mt090430 20090702
          Length = 557

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 22/247 (8%)

Query: 103 GQGLFEGTKAYRKENGGLLLFRPDLNAIRMNIGAERMCMPS-PSIDQFVNAVKQTAI--- 158
           G  ++EG + Y+K+     +F+ + +  R++  A+ +   + PS D+   A+ +T I   
Sbjct: 287 GDSVWEGLRVYKKK-----IFKLEEHLDRISDSAKALAFENVPSRDEIKEAIFKTLIRNG 341

Query: 159 ----ANKRWVPPPGKGTLYIRPLL-MGTGPVLGVAPSPEYTFLVYASPVGNYFKGGFAPL 213
               A+ R     GK  +    LL  G  P L +          +  PV +  +G     
Sbjct: 342 MFDNAHIRLSLTRGKKKIIQWELLPSGMSPALNLYGCTLIVLAEWKPPVYDNERGI---- 397

Query: 214 NLYVDDEYHRASRGGAGGVKAISNYAPVLKAITRAKNRGFSDVLYLDSVEKKYLEEVSSC 273
            + V     R S          +N    + A     N    D + LD  +  ++ E ++ 
Sbjct: 398 -VLVTATTRRNSPYSLDSKIHHNNLLNNILAKVEGNNANADDAIMLD--KDGFVSETNAT 454

Query: 274 NIFIVKGNVISTPATNGTILPGVTRKSIIEIAQDQGYKVEERVIPVDELVNADEVFCTGT 333
           NIFIVK   + TP  +   LPG+TR +++++   + + +EER I + E+  ADEV+ TGT
Sbjct: 455 NIFIVKKGRVLTPHAD-YCLPGITRATVMDLVVKEHFILEERRISLSEVHTADEVWTTGT 513

Query: 334 AVVVAPV 340
              ++PV
Sbjct: 514 MGELSPV 520


>IMGA|Medtr1g099880.1 Aminotransferase, class IV
           chr01_pseudomolecule_IMGAG_V3 20558399-20564902 E
           EGN_Mt090430 20090702
          Length = 554

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 5/102 (4%)

Query: 244 AITRAKNRGFSDVLYLDSVEKKYLEEVSSCNIFIVKGNVISTPATNGTILPGVTRKS--I 301
           A     N    D + LD  +  ++ E ++ NIFIVK   + TP  +   LPG+TR +  +
Sbjct: 418 AKVEGNNAKADDAIMLD--KDGFVSETNATNIFIVKKGRVLTPHAD-YCLPGITRATFKV 474

Query: 302 IEIAQDQGYKVEERVIPVDELVNADEVFCTGTAVVVAPVGSI 343
           +++   + + +EER I + E+  ADEV+ TGT   ++PV  +
Sbjct: 475 MDLVVKEQFILEERRISLSEVHTADEVWTTGTMGELSPVVKV 516