Jatropha Genome Database

JcCB0232511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0232511.10 + phase: 0 
         (236 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g073850.1 Pyridoxal-5-phosphate-dependent enzyme, bet...   357   2e-99

>IMGA|Medtr1g073850.1 Pyridoxal-5-phosphate-dependent enzyme, beta
           subunit chr01_pseudomolecule_IMGAG_V3 14821160-14816501
           E EGN_Mt090430 20090702
          Length = 605

 Score =  357 bits (917), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 166/236 (70%), Positives = 199/236 (84%)

Query: 1   MFEEKRSIXXXXXXXXXXXXXXYCKYYGLQGKNVVAITSGANMNFDKLRVVTELANVGRQ 60
           MFEEKRSI              YCKYYGL+G+NV+AITSGANMNFDKLR+VTELANVGR+
Sbjct: 370 MFEEKRSILEPAGALALAGAEAYCKYYGLKGENVIAITSGANMNFDKLRIVTELANVGRK 429

Query: 61  QEAVLATVMPEEPGMFKRFCELVGPMNITEFKYRCNSEKEAVVLYSVGLHTVSEIEALQQ 120
           QEA+L TVMPEEPG FK+FCELVG MNITEFKYR +S+++AVVLYSVG+HT  E++ +Q+
Sbjct: 430 QEALLLTVMPEEPGSFKQFCELVGQMNITEFKYRYSSKEKAVVLYSVGVHTPLELKEMQE 489

Query: 121 RMESSQLRTYNLTSSDLVKDHLRYLMGGRLNVQNEVLCHFVFPERPGALMKFLDTFSPRW 180
           RME+S+L T+NL+  DLVKDHLR++MG R ++QNEVLC F FPERPGAL KFLD+FSPRW
Sbjct: 490 RMETSKLVTHNLSDVDLVKDHLRHMMGARPDIQNEVLCRFTFPERPGALTKFLDSFSPRW 549

Query: 181 NISLFHYRGQGETGANVLVGIQVPEHEMDEFHSRANSVGYDYDLVTDDDNFQLLMH 236
           NISLFHYR QGETGANVLVGIQVP  EM+EF+ RA  +GYDY++++DD  F+LLMH
Sbjct: 550 NISLFHYRAQGETGANVLVGIQVPSSEMEEFNDRATGLGYDYNVLSDDLFFKLLMH 605