Jatropha Genome Database

JcCB0231741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0231741.10 + phase: 0 /partial
         (681 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g121000.1 Hydantoinase/oxoprolinase; Hydantoinase B/o...  1136   0.0  

>IMGA|Medtr4g121000.1 Hydantoinase/oxoprolinase; Hydantoinase
            B/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal
            chr04_pseudomolecule_IMGAG_V3 28248863-28244834 E
            EGN_Mt090430 20090702
          Length = 1266

 Score = 1136 bits (2938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/678 (80%), Positives = 605/678 (89%), Gaps = 4/678 (0%)

Query: 1    IAGAIIQAPQLDINTVAAGGGSKLKFQFGAFRVGPESVGAHPGPVCYRKGGQLAVTDANL 60
            IAGAIIQAPQLDINTVAAGGGSKLKFQFGAF+VGPESVGAHPGPVCYRKGG+LA+TDANL
Sbjct: 345  IAGAIIQAPQLDINTVAAGGGSKLKFQFGAFQVGPESVGAHPGPVCYRKGGELAITDANL 404

Query: 61   ILGFVIPDYFPSIFGPHEDQPLDIEATREEFKKLAKQINSYRKSQDASAKDMTVEEIALG 120
            +LG+VIPDYFPSIFGP+EDQPLD+++TRE+F+KLA  IN+YRK+QD SAKDMTVEEIALG
Sbjct: 405  VLGYVIPDYFPSIFGPNEDQPLDVKSTREQFEKLAGNINAYRKNQDPSAKDMTVEEIALG 464

Query: 121  FVNVANETMCRPIRQLTEMKGHETRSHALACFGGAGPQHACAIARSLGMKEVLIHKFCGI 180
            FV+VANETMCRPIRQLTEMKGHET++HALACFGGAGPQHACAIARSLGMKEVLIHKFCGI
Sbjct: 465  FVDVANETMCRPIRQLTEMKGHETKNHALACFGGAGPQHACAIARSLGMKEVLIHKFCGI 524

Query: 181  LSAYGMGLADVVEEAQEPYSAVYGPESVLEASCREDMXXXXXXXXXXAQGFRGENITTET 240
            LSAYGMGLA+VVEEAQEPY+AVYG ES LEAS RE +          +QGF+ ENI+T+T
Sbjct: 525  LSAYGMGLANVVEEAQEPYAAVYGTESTLEASQREALLLKQVKQKLQSQGFKEENISTDT 584

Query: 241  YLNLRYEGTDTSIMVRRHVNEDGSAGDYAVEFVKLFQQEYGFKLQNRNIIICDVRVRGIG 300
            YLNLRYEGTDT+IMV+R + +D    DYA EFV LFQQEYGFKLQNRNI+ICDVRVRGIG
Sbjct: 585  YLNLRYEGTDTAIMVKRKIVKDEIPFDYATEFVSLFQQEYGFKLQNRNIVICDVRVRGIG 644

Query: 301  VTNILKPQVLEPTPSSPKMEGHYKVYFRNGWHDAPLFKLENLGPGHIIVGPSIIMNGNST 360
            VTNIL+PQ +EP   SP +E +YKVYF NGW + PL+KLE LG GH + GP+I+MNGNST
Sbjct: 645  VTNILRPQAIEPASGSPIIEDYYKVYFGNGWQETPLYKLEKLGYGHTMSGPAIVMNGNST 704

Query: 361  VIVEPNCNAVVTKYGNIKIEIGSNMSTEEVAENVADVVQLSIFNHRFMGIAEQMGRTLQR 420
            VIVEPNC A++TKYGNIKIEI S +S+ ++++ VADVVQLSIFNHRFMGIAEQMGRTLQR
Sbjct: 705  VIVEPNCRAIITKYGNIKIEIDSPLSSIKISDKVADVVQLSIFNHRFMGIAEQMGRTLQR 764

Query: 421  TSISTNIKERLDFSCALFGPDGGLVANAPHVPVHLGAMSSTVRWQLNYWGDNLKEGDVLV 480
            TSISTNIKERLDFSCALF P+GGLVANAPHVPVHLGAMSSTVRWQLNYW DNL EGDVLV
Sbjct: 765  TSISTNIKERLDFSCALFDPNGGLVANAPHVPVHLGAMSSTVRWQLNYWNDNLNEGDVLV 824

Query: 481  TNHPCAGGSHLPDITVITPVFDKEKLVFFVASRGHHAEIGGITPGSMPPFSKSIWEEGAA 540
            TNHP AGGSHLPDITV+TPVF   KLVFFVA+RGHHAEIGGITPGSMPPFSKSI EEGAA
Sbjct: 825  TNHPSAGGSHLPDITVVTPVFFNGKLVFFVANRGHHAEIGGITPGSMPPFSKSILEEGAA 884

Query: 541  IKAFKLVESGVFQEEGIIKLLKFPGSDELTYKIPGTRRLQDNLSDLHAQVAANQRGISLI 600
            IKAFKLVE GVFQEEGI+KLL+FP SD+   KI GTRR+QDNLSDL AQVAANQRGI L+
Sbjct: 885  IKAFKLVEKGVFQEEGIVKLLQFPSSDDRGTKIRGTRRIQDNLSDLQAQVAANQRGICLV 944

Query: 601  KELIEQYGLDTVQAYMTYVQLNAEEAVREMLKSVAARVSNQPTVFRENNSVTIEEEEYMD 660
             ELIEQYGL+TVQAYM YVQ+NAE AVREMLKSV  R+S++       N VTIEEE+YMD
Sbjct: 945  LELIEQYGLETVQAYMNYVQMNAEGAVREMLKSVGRRISSE----SNENFVTIEEEDYMD 1000

Query: 661  DGSVIHLKLTIDSDKGEA 678
            DGSVIHLKL+IDS+KGEA
Sbjct: 1001 DGSVIHLKLSIDSNKGEA 1018