Jatropha Genome Database

JcCB0230941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0230941.10 - phase: 1 /pseudo/partial
         (149 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g132850.1 Glycosyl transferase, group 1 chr01_pseudom...   214   1e-56

>IMGA|Medtr1g132850.1 Glycosyl transferase, group 1
           chr01_pseudomolecule_IMGAG_V3 29790454-29794204 E
           EGN_Mt090430 20090702
          Length = 408

 Score =  214 bits (546), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 99/140 (70%), Positives = 117/140 (83%)

Query: 10  LGGLKSLAEREGVSDRVSFITSCSTVERNELLSQCLSVIYTPKDEHFGIVPLEAMAAYKP 69
           L  LK LAE+EGVSD++ F+TSCST ERN LLS+CL V+YTP++EHFGIVPLEAMAAYK 
Sbjct: 269 LEELKDLAEKEGVSDKIKFVTSCSTDERNALLSECLCVLYTPENEHFGIVPLEAMAAYKV 328

Query: 70  VIACNSGGPTETVKDGVTGFLCESTPKAFSLAMAKLIQDPQMAKRMGEQARQHVTESFST 129
           VIACNSGGP E++K+GVTGFLC  TP+ FS AMA LI DPQ A++MG +AR+HV ESFST
Sbjct: 329 VIACNSGGPVESIKNGVTGFLCSPTPQEFSSAMANLINDPQEAEKMGNEARRHVVESFST 388

Query: 130 KIFGQHLNQYLVDIASIKED 149
           K FG HLN+YL+DI   KED
Sbjct: 389 KTFGTHLNRYLIDIYRGKED 408