Jatropha Genome Database

JcCB0229931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0229931.10 + phase: 2 /partial
         (227 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g140980.1 Light-inducible protein CPRF-2, related chr...   100   8e-22
IMGA|Medtr3g132860.1 bZIP transcription factor, bZIP_1 chr03_pse...    59   2e-09
IMGA|Medtr1g010030.1 bZIP transcription factor, bZIP_1 chr01_pse...    57   6e-09
IMGA|Medtr3g132860.2 bZIP transcription factor, bZIP_1 chr03_pse...    54   6e-08
IMGA|Medtr1g010030.3 bZIP transcription factor, bZIP_1 chr01_pse...    54   8e-08

>IMGA|Medtr7g140980.1 Light-inducible protein CPRF-2, related
           chr07_pseudomolecule_IMGAG_V3 34043703-34046960 E
           EGN_Mt090430 20090702
          Length = 389

 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 55/134 (41%), Positives = 76/134 (56%), Gaps = 2/134 (1%)

Query: 87  DPADEKRARRMQXXXXXXXXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDA 146
           +P D KR RRM             KQA L ELE QV +              + +K +++
Sbjct: 190 NPTDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSELRGENSSLLKRLTDVTQKFNNS 249

Query: 147 SVDNRILNANIETLRTKVKMAEDQVKRVTGLNPMLLARSNIPSLGMQFVAGQ-TDTSTNV 205
           +VDNRIL A++ETLR KVKMAE+ VKR TG NP+  A S + S+GM    G  +++S + 
Sbjct: 250 AVDNRILKADVETLRAKVKMAEETVKRFTGSNPVFNAMSEVSSMGMSLFDGSPSESSADA 309

Query: 206 AGPMQTN-NNHFFH 218
           + P+Q + NNHFF 
Sbjct: 310 SVPVQEDPNNHFFQ 323


>IMGA|Medtr3g132860.1 bZIP transcription factor, bZIP_1
           chr03_pseudomolecule_IMGAG_V3 33515592-33511336 E
           EGN_Mt090430 20090702
          Length = 299

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 10/117 (8%)

Query: 87  DPADEKRARRMQXXXXXXXXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDA 146
           +P D KR RR              KQA L+ELEAQV +               +++  +A
Sbjct: 125 NPVDMKRQRRKDSNCESARRSRWRKQAHLSELEAQVEKLKLENATLYKQFTDTSQQFHEA 184

Query: 147 SVDNRILNANIETLRTKVKMAEDQVKRVTGLNPMLLARSNIPSLGMQFVAGQTDTST 203
             +NR+L +++E LR KVK+AED V R           S   SL  QF+  Q   ST
Sbjct: 185 DTNNRVLKSDVEALRAKVKLAEDMVTR----------SSFTTSLNNQFLHNQCQMST 231


>IMGA|Medtr1g010030.1 bZIP transcription factor, bZIP_1
           chr01_pseudomolecule_IMGAG_V3 1556651-1551200 F
           EGN_Mt090430 20090702
          Length = 339

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 16/141 (11%)

Query: 87  DPADEKRARRMQXXXXXXXXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDA 146
           +P D KR RR              KQA L +LE QV Q               +++  DA
Sbjct: 166 NPVDMKRLRRKVSNRESARRSRRRKQAHLADLEVQVEQLRLENASLFKQLTDASQQFRDA 225

Query: 147 SVDNRILNANIETLRTKVKMAEDQVKRVTGLNPMLLARSNIPSLGMQFVAGQTDTSTNVA 206
           + +NR+L +++E LR KVK+AED V R T           +P+   Q +  Q+  +T   
Sbjct: 226 NTNNRVLKSDVEALRAKVKLAEDMVSRGT-----------LPTFNNQLLQNQSQLNTT-- 272

Query: 207 GPMQTNNNHF--FHHSVPNIT 225
            P Q NN++     H  P IT
Sbjct: 273 -PPQINNSNLRCMAHVSPTIT 292


>IMGA|Medtr3g132860.2 bZIP transcription factor, bZIP_1
           chr03_pseudomolecule_IMGAG_V3 33515592-33511336 E
           EGN_Mt090430 20090702
          Length = 171

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 10/112 (8%)

Query: 92  KRARRMQXXXXXXXXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDASVDNR 151
           KR RR              KQA L+ELEAQV +               +++  +A  +NR
Sbjct: 2   KRQRRKDSNCESARRSRWRKQAHLSELEAQVEKLKLENATLYKQFTDTSQQFHEADTNNR 61

Query: 152 ILNANIETLRTKVKMAEDQVKRVTGLNPMLLARSNIPSLGMQFVAGQTDTST 203
           +L +++E LR KVK+AED V R           S   SL  QF+  Q   ST
Sbjct: 62  VLKSDVEALRAKVKLAEDMVTR----------SSFTTSLNNQFLHNQCQMST 103


>IMGA|Medtr1g010030.3 bZIP transcription factor, bZIP_1
           chr01_pseudomolecule_IMGAG_V3 1553273-1551200 F
           EGN_Mt090430 20090702
          Length = 170

 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 16/136 (11%)

Query: 92  KRARRMQXXXXXXXXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDASVDNR 151
           KR RR              KQA L +LE QV Q               +++  DA+ +NR
Sbjct: 2   KRLRRKVSNRESARRSRRRKQAHLADLEVQVEQLRLENASLFKQLTDASQQFRDANTNNR 61

Query: 152 ILNANIETLRTKVKMAEDQVKRVTGLNPMLLARSNIPSLGMQFVAGQTDTSTNVAGPMQT 211
           +L +++E LR KVK+AED V R T           +P+   Q +  Q+  +T    P Q 
Sbjct: 62  VLKSDVEALRAKVKLAEDMVSRGT-----------LPTFNNQLLQNQSQLNTT---PPQI 107

Query: 212 NNNHF--FHHSVPNIT 225
           NN++     H  P IT
Sbjct: 108 NNSNLRCMAHVSPTIT 123