Jatropha Genome Database

JcCB0229861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0229861.10 + phase: 0 /pseudo/partial
         (429 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g094020.1 1-(5-Phosphoribosyl)-5-amino-4-imidazole-ca...   546   e-156

>IMGA|Medtr1g094020.1
           1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate
           (AIR) carboxylase; Sugar transporter superfamily;
           Phosphoribosylaminoimidazole carboxylase, ATPase
           subunit; chr01_pseudomolecule_IMGAG_V3 19332736-19338644
           E EGN_Mt090430 20090702
          Length = 641

 Score =  546 bits (1407), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 256/324 (79%), Positives = 289/324 (89%)

Query: 106 RCGVLTVEIEHVDVATLEKLEQQGIDCQPKASTIKIIQDKYLQKVHFSRHGIPLPEFMQI 165
           RC VLT EIEHVDV TLEKLE+QG+DCQPKASTI+IIQDKY QKVHFS+H IPLPEFM++
Sbjct: 146 RCDVLTFEIEHVDVTTLEKLEKQGVDCQPKASTIRIIQDKYQQKVHFSQHDIPLPEFMRL 205

Query: 166 NNLEGAKKAGDLFGYPLMIKSKRLAYDGRGNAVAKSEEELSFAVAALGGFDRGLYVEKWA 225
           ++LEGAKK G  FGYPLMIKS+RLAYDGRGNAVAK EEEL+ AV ALGGFDRGLY EKWA
Sbjct: 206 DDLEGAKKVGKRFGYPLMIKSRRLAYDGRGNAVAKREEELTSAVDALGGFDRGLYAEKWA 265

Query: 226 PFVKELAVIVARGRDNSIFCYPVVETIHKENICHIVKAPADVPWKIRKLATDVAHEAVSS 285
           PFVKELAVIVARGRDN+I CYPVVETIH++NICHIVK+PADV WKIR+ AT+VA  AV+S
Sbjct: 266 PFVKELAVIVARGRDNTISCYPVVETIHRDNICHIVKSPADVKWKIRERATEVAFNAVNS 325

Query: 286 LEGAGVFAVELFLTSEGQILLNEVAPRPHNSGHHTIESCYTSQFEQHLRAVVGLPLGDPS 345
           LEGAGVFAVELFLT +G+ILLNEVAPRPHNSGHHTIESCYTSQ+EQHLRAVVGLPLGDPS
Sbjct: 326 LEGAGVFAVELFLTEDGEILLNEVAPRPHNSGHHTIESCYTSQYEQHLRAVVGLPLGDPS 385

Query: 346 MKTPAAIMYNLLGEDEGEPGFLLAQQLIGRALNVQGATVHWYDKPEMRKQRKMGHITITG 405
           MKTPAAIMYN+LGE+EGE GF LA QL+ RAL + GA+VHWYDKPEMRKQRKMGHITI G
Sbjct: 386 MKTPAAIMYNILGEEEGELGFQLAHQLMKRALTIPGASVHWYDKPEMRKQRKMGHITIVG 445

Query: 406 PSMGIVEARLNSMLKEQGPDGHSA 429
           PS+  ++  L ++L+ +  D  +A
Sbjct: 446 PSLSNLDGNLATILEGKTLDDKTA 469