Jatropha Genome Database

JcCB0229681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0229681.10 + phase: 0 
         (90 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g130010.1 Histidinol dehydrogenase chr02_pseudomolecu...   166   4e-42

>IMGA|Medtr2g130010.1 Histidinol dehydrogenase
           chr02_pseudomolecule_IMGAG_V3 31578373-31584802 E
           EGN_Mt090430 20090702
          Length = 478

 Score =  166 bits (419), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 77/86 (89%), Positives = 81/86 (94%)

Query: 1   MGQWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKNLGPYVAT 60
           +G WTPESVGDYASGTNHVLPTYGYARMY GVSLDSFLKY+TVQSLTEEGL+ LGPYV T
Sbjct: 391 LGSWTPESVGDYASGTNHVLPTYGYARMYSGVSLDSFLKYITVQSLTEEGLRKLGPYVET 450

Query: 61  MAEVEGLEAHKRAVTLRLADIEARKV 86
           MAEVEGLEAHKRAVTLRL DIEAR+V
Sbjct: 451 MAEVEGLEAHKRAVTLRLQDIEARQV 476