Jatropha Genome Database

JcCB0229331.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0229331.10 - phase: 0 
         (134 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g089890.1 Peptidase M20 chr01_pseudomolecule_IMGAG_V3...   200   2e-52
IMGA|Medtr4g090150.1 Peptidase M20 chr04_pseudomolecule_IMGAG_V3...    54   3e-08

>IMGA|Medtr1g089890.1 Peptidase M20 chr01_pseudomolecule_IMGAG_V3
           18046686-18042200 F EGN_Mt090430 20090702
          Length = 469

 Score =  200 bits (508), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/132 (75%), Positives = 107/132 (81%), Gaps = 7/132 (5%)

Query: 1   MEDFSGYPIHEPFHXXXXXXXXXXXXVDDHGLQKQIDELSSFSDTPAPSVTRVLYTEKDV 60
           ME FSGY I EP               D   LQ QIDELS FSD PAPSVTRVLYT+KDV
Sbjct: 37  MEQFSGYSILEP-------TSFSSLSYDAQALQNQIDELSGFSDAPAPSVTRVLYTDKDV 89

Query: 61  LARRYIKNLMGLSGLSVREDAVGNIFGRWDGSEPELAAVATGSHIDAIPFSGKYDGVVGV 120
           LARRY+KNLMG++GLSVREDAVGNIFGRWDGSEP LAAVATGSHIDAIP+SGKYDGVVGV
Sbjct: 90  LARRYVKNLMGIAGLSVREDAVGNIFGRWDGSEPGLAAVATGSHIDAIPYSGKYDGVVGV 149

Query: 121 LGAIEAINVLKR 132
           LGA+EAI+VLKR
Sbjct: 150 LGAVEAISVLKR 161


>IMGA|Medtr4g090150.1 Peptidase M20 chr04_pseudomolecule_IMGAG_V3
           18969309-18964409 E EGN_Mt090430 20090702
          Length = 563

 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 11/101 (10%)

Query: 32  LQKQIDELSSFSDTP--APSVTRVLYTEKDVLARRYIKNLMGLSGLSVREDAVGNIFGRW 89
           L +Q+ + + + +    +P+ TR +      L R+++++    +GL    D +GN+ GR 
Sbjct: 4   LNEQVSDANDYLERTFLSPATTRAIN-----LIRKWMED----AGLRTWVDQMGNVHGRV 54

Query: 90  DGSEPELAAVATGSHIDAIPFSGKYDGVVGVLGAIEAINVL 130
           +G+     A+  GSH+D +  +GK+DG +G++ AI A+ V+
Sbjct: 55  EGANANAEALLVGSHMDTVVDAGKFDGALGIVSAISALKVM 95



 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 9/84 (10%)

Query: 47  APSVTRVLYTEKDVLARRYIKNLMGLSGLSVREDAVGNIFGRWDGSEPELAAVATGSHID 106
           +P+ TR +      L R+++++    +GL    D +GN+ GR +G+     A+  GSH+D
Sbjct: 163 SPATTRAIN-----LIRKWMED----AGLRTWVDQMGNVHGRVEGANANAEALLVGSHMD 213

Query: 107 AIPFSGKYDGVVGVLGAIEAINVL 130
            +  +GK+DG +G++ AI A+ V+
Sbjct: 214 TVVDAGKFDGALGIVSAISALKVM 237