Jatropha Genome Database

JcCB0224691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0224691.10 + phase: 0 /partial
         (262 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g044000.1 FAD linked oxidase, N-terminal chr03_pseudo...   405   e-114
IMGA|Medtr4g118430.1 FAD linked oxidase, N-terminal chr04_pseudo...   389   e-109
IMGA|Medtr7g108120.1 FAD linked oxidase, N-terminal chr07_pseudo...   356   6e-99
IMGA|Medtr2g046010.1 FAD linked oxidase, N-terminal chr02_pseudo...   234   3e-62
IMGA|Medtr1g019530.1 FAD linked oxidase, N-terminal chr01_pseudo...   220   4e-58
IMGA|Medtr2g045960.1 FAD linked oxidase, N-terminal chr02_pseudo...   211   2e-55

>IMGA|Medtr3g044000.1 FAD linked oxidase, N-terminal
           chr03_pseudomolecule_IMGAG_V3 12179994-12176156 E
           EGN_Mt090430 20090702
          Length = 547

 Score =  405 bits (1042), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 193/257 (75%), Positives = 223/257 (86%), Gaps = 2/257 (0%)

Query: 8   SFHKENNMLFIKSFMVLFLSCMTIRLNLCFSSYHSSLKTLSVDGHFTFD--DLHHAAKDF 65
           S   E N+LFIK FM+LFLSC+TIRLN C SS   SLKTL ++GHF+FD  DL +AAKDF
Sbjct: 26  SLVSEYNILFIKGFMILFLSCITIRLNFCISSIPFSLKTLPLEGHFSFDELDLKNAAKDF 85

Query: 66  GNRFQLLPLAVLHPRSVSDIANTIKHIWQLGPHSQLTVAARGHGHSLQGQAQAHQGVVIN 125
           GNR+Q  P+ VLHP+SVSDIA TIKHIW LGP S LTVAARGHGHSLQGQAQA +GVVIN
Sbjct: 86  GNRYQSHPMTVLHPKSVSDIAVTIKHIWNLGPSSHLTVAARGHGHSLQGQAQAEEGVVIN 145

Query: 126 MESLQGPKMQIHAGKYPYIDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAG 185
           MESL   +++++ G++PY+DVSGGELWI ILHE++KYGLAP+SWTDYLHLTVGGTLSNAG
Sbjct: 146 MESLNVEEIKVYGGEFPYVDVSGGELWIKILHETLKYGLAPRSWTDYLHLTVGGTLSNAG 205

Query: 186 ISGQAFRHGPQISNVYQLEVVTGKGEVVNCSEKQNGDLFHGVLGGLGQFGIITRAQISLE 245
           +SGQAFRHGPQISNV ++E+VTG GEVVNCSE+QNG+LF+ VLGGLGQFGIITRA+I LE
Sbjct: 206 VSGQAFRHGPQISNVQKMEIVTGTGEVVNCSEEQNGELFYSVLGGLGQFGIITRARILLE 265

Query: 246 PAPEQVKWIRVLYSDFA 262
           PAP  VKWIRVLYSDF 
Sbjct: 266 PAPTMVKWIRVLYSDFT 282


>IMGA|Medtr4g118430.1 FAD linked oxidase, N-terminal
           chr04_pseudomolecule_IMGAG_V3 27670012-27665565 E
           EGN_Mt090430 20090702
          Length = 528

 Score =  389 bits (1000), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 186/259 (71%), Positives = 218/259 (84%), Gaps = 3/259 (1%)

Query: 7   ISFHKENNMLFIKSFMVLFLSCMTIRLNLCFSSYHSSLKTLSVDGHFTFDD--LHHAAKD 64
           +SF  + N+LF+K FM+LFLSC+  R N C S+   SLKTL ++GH +FD+  L+ A+KD
Sbjct: 1   MSFFGKQNILFLKGFMILFLSCIATRFNFCLSNNPFSLKTLPLEGHLSFDETSLNKASKD 60

Query: 65  FGNRFQLLPLAVLHPRSVSDIANTIKHIWQLGPHSQLTVAARGHGHSLQGQAQAHQGVVI 124
           FGNR+Q  P+AV++P+SVSDIA TIKHIW +G  S LTVAARGHGHSLQGQ+Q H G+VI
Sbjct: 61  FGNRYQYHPMAVMYPKSVSDIATTIKHIWHMGHSSHLTVAARGHGHSLQGQSQTHGGIVI 120

Query: 125 NMESLQGPKMQIHAGKY-PYIDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSN 183
            MESL+ P+MQIH G   PY+DVSGGELWINILHE++KYGLAP+SWTDYLHLTVGGTLSN
Sbjct: 121 KMESLKVPEMQIHVGNSSPYVDVSGGELWINILHETLKYGLAPRSWTDYLHLTVGGTLSN 180

Query: 184 AGISGQAFRHGPQISNVYQLEVVTGKGEVVNCSEKQNGDLFHGVLGGLGQFGIITRAQIS 243
           AG+SGQAF+HGPQISNV QLE+VTG GEVVNCSEKQN +LF  VLGGLGQFGIITRA+I 
Sbjct: 181 AGVSGQAFKHGPQISNVQQLEIVTGTGEVVNCSEKQNEELFQSVLGGLGQFGIITRARIL 240

Query: 244 LEPAPEQVKWIRVLYSDFA 262
           LEPAP  VKWIRVLYSDF 
Sbjct: 241 LEPAPSMVKWIRVLYSDFT 259


>IMGA|Medtr7g108120.1 FAD linked oxidase, N-terminal
           chr07_pseudomolecule_IMGAG_V3 25383585-25386366 E
           EGN_Mt090430 20090702
          Length = 522

 Score =  356 bits (914), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 166/220 (75%), Positives = 194/220 (88%)

Query: 43  SLKTLSVDGHFTFDDLHHAAKDFGNRFQLLPLAVLHPRSVSDIANTIKHIWQLGPHSQLT 102
           SL++ S DGH +  D   AAKDFGN     PLAVLHP++VSDI+ T+KHI++ G  S+L 
Sbjct: 55  SLQSQSFDGHLSLKDNEDAAKDFGNIHHFPPLAVLHPKTVSDISRTVKHIFEKGSDSELK 114

Query: 103 VAARGHGHSLQGQAQAHQGVVINMESLQGPKMQIHAGKYPYIDVSGGELWINILHESVKY 162
           VAARGHGHSLQGQAQAHQG+VI MESLQ P+M+I  G++P++DVSGGELWINILHE++K+
Sbjct: 115 VAARGHGHSLQGQAQAHQGLVIKMESLQSPEMKIQTGEFPFVDVSGGELWINILHETLKH 174

Query: 163 GLAPKSWTDYLHLTVGGTLSNAGISGQAFRHGPQISNVYQLEVVTGKGEVVNCSEKQNGD 222
           GLAPKSWTDYLHLTVGGTLSNAGISGQAFRHGPQI+N++QLE+VTGKGEVV CSE +N D
Sbjct: 175 GLAPKSWTDYLHLTVGGTLSNAGISGQAFRHGPQINNIFQLEIVTGKGEVVTCSENRNAD 234

Query: 223 LFHGVLGGLGQFGIITRAQISLEPAPEQVKWIRVLYSDFA 262
           LFHGVLGGLGQFGIITRA+ISLEPAP+ VKWIRVLYSDF+
Sbjct: 235 LFHGVLGGLGQFGIITRARISLEPAPKMVKWIRVLYSDFS 274


>IMGA|Medtr2g046010.1 FAD linked oxidase, N-terminal
           chr02_pseudomolecule_IMGAG_V3 12811021-12816196 E
           EGN_Mt090430 20090702
          Length = 440

 Score =  234 bits (598), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 116/220 (52%), Positives = 157/220 (71%), Gaps = 20/220 (9%)

Query: 61  AAKDFGNRFQLLPLAVLHPRSVSDIANTIKHIWQLGPHSQLTVAARGHGHSLQGQAQAHQ 120
           A+ D+GN     P AV  P +V+DI + +K  +         +AARG GHS +GQA A  
Sbjct: 54  ASSDYGNLVHEFPAAVFQPSTVNDIVSLVKLSYN--SSVPFLIAARGQGHSTRGQAMARD 111

Query: 121 GVVINMESLQ------------GPKMQIHAGKYP------YIDVSGGELWINILHESVKY 162
           GVV++M+ L+               + I   + P      Y+DV G +LWI++L+E+++Y
Sbjct: 112 GVVVDMKGLRRLKNNNKNNEHNNKNVGIEVFEDPKVGFGYYVDVGGEQLWIDVLYETLEY 171

Query: 163 GLAPKSWTDYLHLTVGGTLSNAGISGQAFRHGPQISNVYQLEVVTGKGEVVNCSEKQNGD 222
           GLAP SWTDYL+LT+GGTLSNAGISGQ FR+GPQI++V+QL+VVTGKGE V CS++ N +
Sbjct: 172 GLAPVSWTDYLYLTIGGTLSNAGISGQTFRYGPQITSVHQLDVVTGKGEFVTCSKQNNSE 231

Query: 223 LFHGVLGGLGQFGIITRAQISLEPAPEQVKWIRVLYSDFA 262
           LF+GVLGGLGQFGIITRA+I+LEPAP++VKW+R+LYSDF+
Sbjct: 232 LFNGVLGGLGQFGIITRARIALEPAPKRVKWVRLLYSDFS 271


>IMGA|Medtr1g019530.1 FAD linked oxidase, N-terminal
           chr01_pseudomolecule_IMGAG_V3 4000559-4005967 E
           EGN_Mt090430 20090702
          Length = 509

 Score =  220 bits (561), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 111/216 (51%), Positives = 146/216 (67%), Gaps = 5/216 (2%)

Query: 48  SVDGHFTFDDLHHAAKDFGNRFQLLPLAVLHPRSVSDIANTIKHIWQLGPHSQLTVAARG 107
           S+   F F     A+KDFG      PLAVL P + +D+   +K        + LTVAARG
Sbjct: 24  SLQSSFHFAPNSIASKDFGGMKSSTPLAVLRPYTTADVVKAVK---AAATTTNLTVAARG 80

Query: 108 HGHSLQGQAQAHQGVVINMESLQGPKMQI-HAGKYPYIDVSGGELWINILHESV-KYGLA 165
           +GHS+ GQA A +G+V++M +      Q+ +    P++DVSGG LW  +L   V  + L 
Sbjct: 81  NGHSINGQAMAEKGLVLDMRATAAEPFQLLYVDGVPHVDVSGGALWEEVLKRCVSNFQLV 140

Query: 166 PKSWTDYLHLTVGGTLSNAGISGQAFRHGPQISNVYQLEVVTGKGEVVNCSEKQNGDLFH 225
           P+SWTDYL LTVGGTLSNAG+SGQ FR+GPQ +NV +LEVVTGKG+   C++ QN DLF 
Sbjct: 141 PRSWTDYLGLTVGGTLSNAGVSGQTFRYGPQTANVTELEVVTGKGDSFVCNDNQNSDLFF 200

Query: 226 GVLGGLGQFGIITRAQISLEPAPEQVKWIRVLYSDF 261
             LGGLGQFG+ITRA+I L+ AP+ V+WIRV+YS+F
Sbjct: 201 ASLGGLGQFGVITRARIVLQQAPDMVRWIRVIYSEF 236


>IMGA|Medtr2g045960.1 FAD linked oxidase, N-terminal
           chr02_pseudomolecule_IMGAG_V3 12778928-12782520 H
           EGN_Mt090430 20090702
          Length = 535

 Score =  211 bits (538), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 111/227 (48%), Positives = 151/227 (66%), Gaps = 24/227 (10%)

Query: 58  LHHAAKDFGNRFQLLPLAVLHPRSVSDIANTIKHIWQLGPHSQLTVAARGHGHSLQGQAQ 117
           L  A+ D+G+     P AVL P S+SDIAN I +   L PHS  T++ RG  HS+ GQA 
Sbjct: 48  LSQASTDYGHIIHENPFAVLEPTSISDIANLINYSNSL-PHS-FTISPRGQAHSVLGQAM 105

Query: 118 AHQGVVINMESLQ------GPKMQIHAGKYP---YIDVSGGELWINILHESVKYGLAPKS 168
              G+V+NM  L       G  +     K P   Y+DV G +LWI++L+ ++K+GL P S
Sbjct: 106 TQNGIVVNMTQLNWYRNGSGIVVSDCDVKNPLGCYVDVGGEQLWIDVLNATLKHGLTPLS 165

Query: 169 WTDYLHLTVGGTLSNAGISGQAFRHGPQISNVYQLEVVTGKGEVVNCSEKQNGDLFHGVL 228
           WTDYL+L+VGGTLSNAGI GQ FR GPQISNV +L+V+TG+G +V CS+++N ++F+ VL
Sbjct: 166 WTDYLYLSVGGTLSNAGIGGQTFRFGPQISNVLELDVITGQGNIVTCSQEKNSEVFYAVL 225

Query: 229 GGLGQFGIITRAQISLEPAPEQ-------------VKWIRVLYSDFA 262
           GGLGQFG+ITRA+I L PAP +             VKW+R++Y+DF+
Sbjct: 226 GGLGQFGVITRARILLGPAPTRASIIISFSFTHMYVKWLRLIYNDFS 272