Jatropha Genome Database
- JcCB0224601.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0224601.10 + phase: 1 /pseudo
(181 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g102990.1 Myb, DNA-binding; Response regulator receiv... 218 1e-57
IMGA|Medtr3g138060.1 Myb, DNA-binding; Response regulator receiv... 159 1e-39
IMGA|Medtr8g146140.1 Response regulator receiver; Myb-like DNA-b... 145 2e-35
IMGA|Medtr8g146130.1 Response regulator, RegA/PrrA/ActR type; Ho... 143 5e-35
IMGA|Medtr8g146120.1 Response regulator, RegA/PrrA/ActR type; Ho... 142 1e-34
IMGA|AC232874_6.1 Response regulator receiver AC232874.1 20706-2... 133 4e-32
IMGA|AC235748_5.1 Response regulator receiver; Myb-like DNA-bind... 129 9e-31
IMGA|AC235748_7.1 Response regulator receiver; Myb-like DNA-bind... 109 7e-25
IMGA|Medtr4g025080.1 Response regulator, RegA/PrrA/ActR type; Ho... 94 5e-20
IMGA|Medtr7g027130.1 Myb, DNA-binding; Response regulator receiv... 89 2e-18
IMGA|AC232874_22.1 Response regulator receiver; Myb-like DNA-bin... 84 5e-17
IMGA|Medtr4g142310.1 Response regulator receiver chr04_pseudomol... 80 6e-16
IMGA|Medtr4g142200.1 Response regulator receiver chr04_pseudomol... 80 6e-16
IMGA|Medtr4g156880.1 Response regulator, RegA/PrrA/ActR type; Ho... 77 6e-15
IMGA|Medtr5g068160.1 Response regulator, RegA/PrrA/ActR type chr... 75 2e-14
IMGA|Medtr3g122660.2 Response regulator receiver chr03_pseudomol... 69 1e-12
IMGA|Medtr3g122660.1 Response regulator receiver chr03_pseudomol... 69 1e-12
IMGA|Medtr7g146130.1 Response regulator receiver; CCT chr07_pseu... 66 8e-12
IMGA|Medtr4g079920.1 Response regulator receiver; CCT chr04_pseu... 61 3e-10
IMGA|Medtr5g014220.2 Myb, DNA-binding; Response regulator receiv... 54 4e-08
IMGA|Medtr5g014220.1 Myb, DNA-binding; Response regulator receiv... 54 6e-08
IMGA|Medtr8g124910.1 Response regulator receiver chr08_pseudomol... 52 1e-07
IMGA|Medtr6g096370.1 Response regulator receiver chr06_pseudomol... 49 2e-06
IMGA|Medtr5g037580.1 Response regulator receiver chr05_pseudomol... 49 2e-06
IMGA|Medtr8g039500.1 Response regulator receiver chr08_pseudomol... 47 5e-06
>IMGA|Medtr3g102990.1 Myb, DNA-binding; Response regulator receiver;
Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr03_pseudomolecule_IMGAG_V3
25254714-25258529 E EGN_Mt090430 20090702
Length = 570
Score = 218 bits (555), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 134/180 (74%), Gaps = 21/180 (11%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TTC LAR AL+LLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGE S+
Sbjct: 44 TTCCLARHALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSR 103
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLS 120
+MKG+QHGA DYLLKPIRM++LRN+WQ+V +++ +VR+ E ES+ + RNG ++S
Sbjct: 104 VMKGVQHGACDYLLKPIRMKELRNIWQHV-FRKRIHEVREFENFESFESMHLMRNGSEMS 162
Query: 121 -----------TSAKKRRDPG---------DISFIEKARVVWSADLHRKFVQAVCQIGLD 160
TS KKR+D D S +KARVVWS DLH+KFV+AV QIG D
Sbjct: 163 EEGNLFALEDMTSTKKRKDVDSRHDDKEFLDSSSSKKARVVWSVDLHQKFVKAVNQIGFD 222
>IMGA|Medtr3g138060.1 Myb, DNA-binding; Response regulator receiver;
Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr03_pseudomolecule_IMGAG_V3
35178774-35183412 F EGN_Mt090430 20090702
Length = 645
Score = 159 bits (401), Expect = 1e-39, Method: Composition-based stats.
Identities = 86/183 (46%), Positives = 113/183 (61%), Gaps = 23/183 (12%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TT A AL +LRE KD +D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+S G+
Sbjct: 39 TTTSQAITALTMLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKL 98
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIV----------AGMESI 110
+MKGI HGA DYLLKP+R+E+L+N+WQ+V+ +K D + +G+ S
Sbjct: 99 VMKGISHGACDYLLKPVRLEELKNIWQHVIRKKKSDPKEKNKTSKPDKTTSDSGSGLRSA 158
Query: 111 QMTRNGEDLSTSAKKR-------------RDPGDISFIEKARVVWSADLHRKFVQAVCQI 157
+ E+ + K++ D D S +K RVVWS +LHRKFV AV Q+
Sbjct: 159 GAENSDENGKLTKKRKDQDEDEDEDKENGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQL 218
Query: 158 GLD 160
G+D
Sbjct: 219 GID 221
>IMGA|Medtr8g146140.1 Response regulator receiver; Myb-like
DNA-binding region, SHAQKYF class
chr08_pseudomolecule_IMGAG_V3 35681662-35678501 E
EGN_Mt090430 20090702
Length = 549
Score = 145 bits (365), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 16/175 (9%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TT +AL LLRE+KD +D+VISDV+MPDMDGFKLLE VGLEMDLP IM+SV+ + K
Sbjct: 3 TTTTKPVEALELLREKKDMFDLVISDVSMPDMDGFKLLEQVGLEMDLPFIMLSVNDDIEK 62
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLS 120
+MK + HGA +YL+KPIRME+L+++WQ+V+ + K ++ I++ Q T + E+++
Sbjct: 63 VMKSVIHGACNYLVKPIRMEELKSIWQHVVRKKIESKDQNQGIISDGVYGQDT-SSENIA 121
Query: 121 TSAK----KRR-----------DPGDISFIEKARVVWSADLHRKFVQAVCQIGLD 160
K KR+ + S +K R+VW +LHRKFV AV +GLD
Sbjct: 122 NKNKMHGRKRKEQTEEEEAEQDNDEKCSTRKKPRLVWDHELHRKFVSAVNHVGLD 176
>IMGA|Medtr8g146130.1 Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr08_pseudomolecule_IMGAG_V3
35671410-35667698 H EGN_Mt090430 20090702
Length = 633
Score = 143 bits (361), Expect = 5e-35, Method: Composition-based stats.
Identities = 77/180 (42%), Positives = 114/180 (63%), Gaps = 18/180 (10%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TT + +AL LLRE++ +D++ISDVNMP+MDGFKLLE VGLEMDLP IM+S ++ +
Sbjct: 48 TTTTKSVEALELLREKRSMFDLIISDVNMPEMDGFKLLEQVGLEMDLPFIMLSGHDDRER 107
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDL- 119
+MKG+ GA DYL+KPIR+E+L+N+WQ+V+ + K ++ I++ S Q T + E++
Sbjct: 108 VMKGVMKGACDYLVKPIRLEELKNIWQHVVRKKIESKDQNQGIISDGVSGQDT-SSENIP 166
Query: 120 ---STSAKKRRDPGDI-------------SFIEKARVVWSADLHRKFVQAVCQIGLDSKY 163
T +KR++ + S +K R VW +LH+KFV V +GLD Y
Sbjct: 167 KKNKTHGRKRKEQSEEEEADTDEENDEEHSTRKKPRFVWDNELHKKFVSIVNLLGLDKAY 226
>IMGA|Medtr8g146120.1 Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr08_pseudomolecule_IMGAG_V3
35666097-35662664 H EGN_Mt090430 20090702
Length = 596
Score = 142 bits (357), Expect = 1e-34, Method: Composition-based stats.
Identities = 77/183 (42%), Positives = 113/183 (61%), Gaps = 21/183 (11%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TT +AL LLRE++D +D+VISDV+MP+MDGFKLLE VGLE+DLP IM+S + ++ +
Sbjct: 48 TTTTKPVEALELLREKRDMFDLVISDVSMPEMDGFKLLEQVGLEIDLPFIMLSGNDDRER 107
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLS 120
+MKG+ GA DYL+KPIR+E+L+N+WQ+V+ + K R+ I+ Q T + E+++
Sbjct: 108 VMKGVMKGACDYLVKPIRLEELKNIWQHVVRKKIESKDRNKGIITDGICSQDT-SSENIA 166
Query: 121 TSAKKR--------------------RDPGDISFIEKARVVWSADLHRKFVQAVCQIGLD 160
K R + + S +K R+VW +LH+KFV V Q+GLD
Sbjct: 167 NRNKTRGQKIKEQSEDEEEEEEEAEEDNDEERSTRKKPRLVWDDELHKKFVSIVSQLGLD 226
Query: 161 SKY 163
Y
Sbjct: 227 KAY 229
>IMGA|AC232874_6.1 Response regulator receiver AC232874.1
20706-21636 E EGN_Mt090430 20090702
Length = 176
Score = 133 bits (335), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 95/163 (58%), Gaps = 43/163 (26%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TT A AL +L+E D +D+VI++V+MPDMDG KLLE VGLEMDLPVIM+S GE
Sbjct: 39 TTTSEAITALTMLQENIDMFDLVIAEVHMPDMDGLKLLELVGLEMDLPVIMLSAHGETEL 98
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLS 120
+MK I HGA D+LLKP+R+E+LRN+WQ+V+ RN E
Sbjct: 99 VMKAISHGARDFLLKPVRLEELRNIWQHVI-----------------------RNKE--- 132
Query: 121 TSAKKRRDPGDISFIEKARVVWSADLHRKFVQAVCQIGLDSKY 163
++ VWS +LHRKF++ V Q+G+DS +
Sbjct: 133 -----------------SQFVWSVELHRKFLETVNQLGIDSMF 158
>IMGA|AC235748_5.1 Response regulator receiver; Myb-like DNA-binding
region, SHAQKYF class AC235748.1 17294-18890 E
EGN_Mt090430 20090702
Length = 222
Score = 129 bits (324), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 93/160 (58%), Gaps = 43/160 (26%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TT A AL +L+E D +D+VI++V+MPDMDG KLLE VGLEMDLPVIM+S GE
Sbjct: 39 TTTSEAITALTMLQENIDMFDLVIAEVHMPDMDGLKLLELVGLEMDLPVIMLSAHGETEL 98
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLS 120
+MK I HGA D+LLKP+R+E+LRN+WQ+V+ RN E
Sbjct: 99 VMKAISHGARDFLLKPVRLEELRNIWQHVI-----------------------RNKE--- 132
Query: 121 TSAKKRRDPGDISFIEKARVVWSADLHRKFVQAVCQIGLD 160
++ VWS +LHRKF++ V Q+G+D
Sbjct: 133 -----------------SQFVWSVELHRKFLETVNQLGVD 155
>IMGA|AC235748_7.1 Response regulator receiver; Myb-like DNA-binding
region, SHAQKYF class; Homeodomain-like AC235748.1
22692-24448 E EGN_Mt090430 20090702
Length = 234
Score = 109 bits (273), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 34/161 (21%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLP-VIMMSVDGEKS 59
TT A+ AL +LRE KD +D+VI+DV++PDMDG KLLE V LE DLP V+M+S +
Sbjct: 39 TTTSQAKTALTMLRENKDKFDLVIADVHLPDMDGLKLLELVELETDLPVVVMLSESSDNE 98
Query: 60 KLMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDL 119
+MK + HGASD+L+KP+R+++L+ +WQ+V+
Sbjct: 99 LVMKAVFHGASDFLVKPVRLQELKTIWQHVI----------------------------- 129
Query: 120 STSAKKRRDPGDISFIEKARVVWSADLHRKFVQAVCQIGLD 160
+K++D D+S +K++ VWS +LH KFV AV Q+G+D
Sbjct: 130 ----RKKKDNEDLSAQKKSQSVWSVELHHKFVAAVNQLGID 166
>IMGA|Medtr4g025080.1 Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr04_pseudomolecule_IMGAG_V3
5908624-5911978 H EGN_Mt090430 20090702
Length = 230
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 86/148 (58%), Gaps = 14/148 (9%)
Query: 16 RKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSKLMKGIQHGASDYLLK 75
+K +D+++ D MP+MD ++HV L++ +P IMM+VD K+ +MK I+ GA +Y K
Sbjct: 19 KKCCFDVMLIDARMPNMDACDFVQHVSLQLQIPAIMMAVDSTKNSIMKSIECGACEYWTK 78
Query: 76 PIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLSTSAKKRRDPGDIS-- 133
P+ ++ + +WQ+V + + + ++ IV G +Q R K+ R+ D S
Sbjct: 79 PLIEKKFKTMWQHV-ARKGMPENKEYAIV-GSSMVQANR---------KRGREDADASKE 127
Query: 134 -FIEKARVVWSADLHRKFVQAVCQIGLD 160
+ AR WS +LH++F+ AV Q+GLD
Sbjct: 128 THAKTARFSWSPELHQRFLWAVNQLGLD 155
>IMGA|Medtr7g027130.1 Myb, DNA-binding; Response regulator receiver;
Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr07_pseudomolecule_IMGAG_V3
7085204-7081559 H EGN_Mt090430 20090702
Length = 595
Score = 88.6 bits (218), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 98/167 (58%), Gaps = 21/167 (12%)
Query: 6 ARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSKLMKGI 65
AR AL L+E + +D+VI++ ++ M+G + +H+ + +P+IMMS D S + K +
Sbjct: 16 ARHALITLQENEGLFDLVITEFHLVGMNGLEFQKHIKDQFQIPIIMMSEDNRPSLISKTL 75
Query: 66 QHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLSTS--- 122
++GA+ Y++KP E +++W+YV+ +K +K+ +ES+ RN E+ ++S
Sbjct: 76 ENGAAQYIVKPFCAEDFKDIWKYVMEGKK-EKLF-------IESL-FVRNEEEETSSEPK 126
Query: 123 ---------AKKRRDPGDISFIEKARVVWSADLHRKFVQAVCQIGLD 160
+K+ + DI ++K ++VW+ LH+ F+ AV QIGL+
Sbjct: 127 NKKKHCKRKSKESQGEKDIQVVKKQKLVWTPYLHKMFLLAVNQIGLE 173
>IMGA|AC232874_22.1 Response regulator receiver; Myb-like
DNA-binding region, SHAQKYF class; Homeodomain-like
AC232874.1 68409-70164 E EGN_Mt090430 20090702
Length = 228
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 38/160 (23%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TT A+ AL +LRE KD +D+VI+DV++PDMDG KLLE V LE DLPV++ +
Sbjct: 39 TTTSQAKTALTMLRENKDKFDLVIADVHLPDMDGLKLLELVELETDLPVVV----SKWGD 94
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLS 120
L D+L+KP+R+++L+ +WQ+V+
Sbjct: 95 LFCSFP-WCLDFLVKPVRLQELKTIWQHVI------------------------------ 123
Query: 121 TSAKKRRDPGDISFIEKARVVWSADLHRKFVQAVCQIGLD 160
+K++D D+S +K++ VWS +LH KFV AV Q+G+D
Sbjct: 124 ---RKKKDNEDLSAQKKSQSVWSVELHHKFVAAVNQLGID 160
>IMGA|Medtr4g142310.1 Response regulator receiver
chr04_pseudomolecule_IMGAG_V3 35371948-35373057 H
EGN_Mt090430 20090702
Length = 265
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TTC A A LL E K D+V+ + MPDMD + + HV ++++ VIMM DG +
Sbjct: 45 TTCSKASFAFKLLTETKGCVDVVLIEAQMPDMDSYDFVRHVTQQINISVIMMCDDGSTNA 104
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYV 89
+MK + +GA ++ +KP Q++N+WQ V
Sbjct: 105 VMKAVTNGACEFWIKPFIENQIKNMWQCV 133
>IMGA|Medtr4g142200.1 Response regulator receiver
chr04_pseudomolecule_IMGAG_V3 35298034-35299143 H
EGN_Mt090430 20090702
Length = 265
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TTC A A LL E K D+V+ + MPDMD + + HV ++++ VIMM DG +
Sbjct: 45 TTCSKASFAFKLLTETKGCVDVVLIEAQMPDMDSYDFVRHVTQQINISVIMMCDDGSTNA 104
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYV 89
+MK + +GA ++ +KP Q++N+WQ V
Sbjct: 105 VMKAVTNGACEFWIKPFIENQIKNMWQCV 133
>IMGA|Medtr4g156880.1 Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr04_pseudomolecule_IMGAG_V3
38956664-38953063 E EGN_Mt090430 20090702
Length = 734
Score = 76.6 bits (187), Expect = 6e-15, Method: Composition-based stats.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 13/169 (7%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIM-MSVDGEKS 59
TTC A+NL+ + K +D+V+ + MPDMD F L+ + ++D+PVIM M +G +
Sbjct: 40 TTCWTVSSAMNLIAQ-KVHFDLVLLETQMPDMDSFDFLQQLTQQIDIPVIMTMCSEGSTT 98
Query: 60 KLMKGIQHGASDYLLKPIRMEQLRNLWQY-VLLTEKLDKVRDIEIVAGMESIQ------- 111
++ I++GA D +KP Q++ +W + V K +K + I G+E Q
Sbjct: 99 GILNAIENGACDCWVKPFSENQVKYMWHHAVRKMMKGNKKQKINEQLGVEGSQIRARDDS 158
Query: 112 -MTRNGEDL--STSAKKRRDPGDISFIEKARVVWSADLHRKFVQAVCQI 157
+ N ED+ KK + +K RVVWS +LH +F++AV ++
Sbjct: 159 NLCLNDEDIPEPPPTKKTKKRKKTKKTKKERVVWSLELHEQFMKAVKEL 207
>IMGA|Medtr5g068160.1 Response regulator, RegA/PrrA/ActR type
chr05_pseudomolecule_IMGAG_V3 24327679-24330012 H
EGN_Mt090430 20090702
Length = 310
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 8/89 (8%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
T C A +ALNLL ERKD +D+++ D +MP+MD + ++H ++++PVI SV
Sbjct: 41 TKCNTASEALNLL-ERKDCFDVMLIDAHMPNMDAYDFVQHATGQLNIPVISNSV------ 93
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYV 89
K I +GA +Y KP+ EQ + +WQ+V
Sbjct: 94 -TKSITYGACEYWTKPLYEEQFKIMWQHV 121
>IMGA|Medtr3g122660.2 Response regulator receiver
chr03_pseudomolecule_IMGAG_V3 30551992-30549295 E
EGN_Mt090430 20090702
Length = 413
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
Query: 9 ALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL----PVIMMSVDGEKSKLMKG 64
A +L+ R D+++++V++P + G+ LL + +E D+ PVIMMS S + K
Sbjct: 91 AWEILKGRPRSIDLILTEVDLPAISGYALLTLI-MEHDICKSIPVIMMSSQDSVSTVYKC 149
Query: 65 IQHGASDYLLKPIRMEQLRNLWQYV 89
+ GA+DYL+KPIR+ +LRNLWQ+V
Sbjct: 150 MLRGAADYLVKPIRINELRNLWQHV 174
>IMGA|Medtr3g122660.1 Response regulator receiver
chr03_pseudomolecule_IMGAG_V3 30551992-30549295 E
EGN_Mt090430 20090702
Length = 414
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
Query: 9 ALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL----PVIMMSVDGEKSKLMKG 64
A +L+ R D+++++V++P + G+ LL + +E D+ PVIMMS S + K
Sbjct: 91 AWEILKGRPRSIDLILTEVDLPAISGYALLTLI-MEHDICKSIPVIMMSSQDSVSTVYKC 149
Query: 65 IQHGASDYLLKPIRMEQLRNLWQYV 89
+ GA+DYL+KPIR+ +LRNLWQ+V
Sbjct: 150 MLRGAADYLVKPIRINELRNLWQHV 174
>IMGA|Medtr7g146130.1 Response regulator receiver; CCT
chr07_pseudomolecule_IMGAG_V3 34887893-34891610 E
EGN_Mt090430 20090702
Length = 636
Score = 66.2 bits (160), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 12/92 (13%)
Query: 7 RDALN---LLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMD------LPVIMMSVDGE 57
RD L L+ + D+V+++V++P + GF LL + MD +P+IMMS
Sbjct: 44 RDGLKAWETLKNKSLDIDLVLTEVDLPSISGFSLLTQI---MDHHNCKNIPLIMMSSQDS 100
Query: 58 KSKLMKGIQHGASDYLLKPIRMEQLRNLWQYV 89
S + K + +GA D+L+KP+R +LRNLWQ+V
Sbjct: 101 VSTVFKFMLNGAVDFLIKPVRRNELRNLWQHV 132
>IMGA|Medtr4g079920.1 Response regulator receiver; CCT
chr04_pseudomolecule_IMGAG_V3 16245711-16238402 E
EGN_Mt090430 20090702
Length = 796
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 9 ALNLLRERKDGYDIVISDVNMPDMDGF----KLLEHVGLEMDLPVIMMSVDGEKSKLMKG 64
A +L + + D+V++++ MP + G K++ H L+ ++PVIMMS + K
Sbjct: 124 AWKVLEDPGNHIDLVLTEIAMPFVTGIGLLCKIMSHKTLK-NIPVIMMSCHDSMGIVFKC 182
Query: 65 IQHGASDYLLKPIRMEQLRNLWQYV 89
+ GA+D+L+KPIR +L+NLWQ+V
Sbjct: 183 LSKGAADFLVKPIRRNELKNLWQHV 207
>IMGA|Medtr5g014220.2 Myb, DNA-binding; Response regulator receiver;
Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr05_pseudomolecule_IMGAG_V3
4502320-4508391 E EGN_Mt090430 20090702
Length = 543
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 38/188 (20%)
Query: 7 RDALNLLRERKDGYDIVISDVNMPDMDG-FKLLEHVGLEMDLPVIMMSVDGEKSKLMKGI 65
+AL+ + + + I +V++ DG FK LE+ DLP IM S + +MK I
Sbjct: 51 NEALSAISSSPKCFHVAIVEVSISCPDGGFKFLENA---KDLPTIMTSNSQCINTMMKCI 107
Query: 66 QHGASDYLLKPIRMEQLRNLWQYVL----------LTEKLDKVRDIEIVAGMESIQ---- 111
GA ++L KP+ ++L+N+WQ+V+ L+E L V+ E V M +Q
Sbjct: 108 ALGAVEFLTKPLSEDKLKNIWQHVVHKAFNAEASALSESLKPVK--ESVESMLHLQTDNT 165
Query: 112 ---------------MTRNGEDLSTSAKKRRDPGDISFIEKARVVWSADLHRKFVQAVCQ 156
+ N + S ++ K P + AR+V D H Q C
Sbjct: 166 LHESTISIDLDKVSKFSDNEHEHSAASDKYPAPSTPQLKQGARLVDDGDCHE---QTNCL 222
Query: 157 IGLDSKYH 164
I +S H
Sbjct: 223 IEKESGEH 230
>IMGA|Medtr5g014220.1 Myb, DNA-binding; Response regulator receiver;
Response regulator, RegA/PrrA/ActR type;
Homeodomain-related chr05_pseudomolecule_IMGAG_V3
4502320-4508391 E EGN_Mt090430 20090702
Length = 548
Score = 53.5 bits (127), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 40/188 (21%)
Query: 8 DALNLLRERKDGYDIVISDVNM--PDMDGFKLLEHVGLEMDLPVIMMSVDGEKSKLMKGI 65
+AL+ + + + I +V++ PD GFK LE+ DLP IM S + +MK I
Sbjct: 52 EALSAISSSPKCFHVAIVEVSISCPD-GGFKFLENA---KDLPTIMTSNSQCINTMMKCI 107
Query: 66 QHGASDYLLKPIRMEQLRNLWQYVL----------LTEKLDKVRDIEIVAGMESIQ---- 111
GA ++L KP+ ++L+N+WQ+V+ L+E L V+ E V M +Q
Sbjct: 108 ALGAVEFLTKPLSEDKLKNIWQHVVHKAFNAEASALSESLKPVK--ESVESMLHLQTDNT 165
Query: 112 ---------------MTRNGEDLSTSAKKRRDPGDISFIEKARVVWSADLHRKFVQAVCQ 156
+ N + S ++ K P + AR+V D H Q C
Sbjct: 166 LHESTISIDLDKVSKFSDNEHEHSAASDKYPAPSTPQLKQGARLVDDGDCHE---QTNCL 222
Query: 157 IGLDSKYH 164
I +S H
Sbjct: 223 IEKESGEH 230
>IMGA|Medtr8g124910.1 Response regulator receiver
chr08_pseudomolecule_IMGAG_V3 29028284-29026258 E
EGN_Mt090430 20090702
Length = 214
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 63/103 (61%), Gaps = 11/103 (10%)
Query: 21 DIVISDVNMPDMDGFKLLEHV---GLEMDLPVIMMSVDGEKSKLMKGIQHGASDYLLKPI 77
+++++D +MP M G++LL+ + + ++PV++MS + +++ + ++ GA D+LLKP+
Sbjct: 82 NLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPV 141
Query: 78 RMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLS 120
++ +R L +++ E V+D E S++ R+ +D S
Sbjct: 142 KLSDVRRLKDFIMRGE----VKDGEKC----SLKRMRSSDDCS 176
>IMGA|Medtr6g096370.1 Response regulator receiver
chr06_pseudomolecule_IMGAG_V3 21039048-21041137 E
EGN_Mt090430 20090702
Length = 177
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 2 TCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSKL 61
T A AL LR KD + ++I + ++ M+GF+ + + E LP+I
Sbjct: 78 TAIYAHHALVTLRNSKDLFHLIIGEFHIFGMNGFEFQKQIQDEFQLPII----------- 126
Query: 62 MKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEK 94
+ GA+ Y++KP + LR++W+Y + +K
Sbjct: 127 ----EQGAAPYIVKPFCPKDLRDIWKYAMEAKK 155
>IMGA|Medtr5g037580.1 Response regulator receiver
chr05_pseudomolecule_IMGAG_V3 15799825-15801298 E
EGN_Mt090430 20090702
Length = 237
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 21 DIVISDVNMPDMDGFKLLEHVGLEMD---LPVIMMSVDGEKSKLMKGIQHGASDYLLKPI 77
D+VI+D MP M G++LL+ + +PV++MS + ++ + ++ GA D+++KP+
Sbjct: 76 DLVITDYCMPGMTGYELLKKIKESTTFRAIPVVIMSSENILPRIDRCLEEGAEDFIVKPV 135
Query: 78 RMEQLRNLWQYVLLTEKLDKVRDIEIV 104
++ ++ L Y+ E +D E++
Sbjct: 136 KLSDVKRLKGYMTTKEVNVGSQDTEVI 162
>IMGA|Medtr8g039500.1 Response regulator receiver
chr08_pseudomolecule_IMGAG_V3 8290123-8291589 F
EGN_Mt090430 20090702
Length = 177
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 21 DIVISDVNMPDMDGFKLLEHVGLEM---DLPVIMMSVDGEKSKLMKGIQHGASDYLLKPI 77
+++I+D MP M G+ LL + D+PV++MS + S++ + ++ GA ++ LKP+
Sbjct: 73 NLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPV 132
Query: 78 RMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQ 111
++ + L ++L ++ ++ GME Q
Sbjct: 133 QLSDVSKLKPHLLKSKVKEENEQPIKRKGMEETQ 166