Jatropha Genome Database

JcCB0224181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0224181.10 - phase: 0 
         (335 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g078040.1 Inositol 1, 3, 4-trisphosphate 56-kinase ch...   363   e-101
IMGA|Medtr5g005520.1 Ribosomal protein L19; Inositol 1, 3, 4-tri...   224   5e-59

>IMGA|Medtr8g078040.1 Inositol 1, 3, 4-trisphosphate 56-kinase
           chr08_pseudomolecule_IMGAG_V3 15696781-15695040 E
           EGN_Mt090430 20090702
          Length = 385

 Score =  363 bits (931), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/326 (54%), Positives = 228/326 (69%), Gaps = 10/326 (3%)

Query: 2   LTQMKRHRIGYALAPKKVQSFIQPSLISHANNHNIDLIPIDPSQSLVEQGPFDCIIHKLY 61
           + + K   IGYALAPKK  SFI+ SL++ A++  I LI ID ++ L++QGPFDCI+HKLY
Sbjct: 1   MAEKKHGVIGYALAPKKQNSFIRDSLLTLASSRGIKLIQIDSTKPLIDQGPFDCILHKLY 60

Query: 62  GPDWKLQLERFSLENPNVPIIDSPDSIERLHNRISMLEVVNRLNI-----PRRSQVLEVP 116
           G DWK QL++F + NPN  I+D+P++IERLHNRISML+VV+ L +      +  +   +P
Sbjct: 61  GDDWKRQLQQFQIRNPNAVILDAPEAIERLHNRISMLQVVSELRVRVGVDEKGGETFGIP 120

Query: 117 KQVVVSDSENLKGNGLIGDLGFPLVAKPLVADGSAKSHKMYQIFDTEGLKRLDAPIILQN 176
           KQ+V+ D E L        L FP++AKPLVADGSAKSHKM  +F    L +L  PI+LQ 
Sbjct: 121 KQIVIYDKETLSDGQAWESLKFPVIAKPLVADGSAKSHKMALVFSHGALNKLKPPIVLQE 180

Query: 177 FVNHGGVIFKVYVAGDHVQCVKRKSLPDISQEK-LATLKGALSFSQISNLTARGKNSGNS 235
           FVNHGGVIFKVYV G+HV+CVKRKSLPD+S+EK L   +  LSFSQ+SNL  R     + 
Sbjct: 181 FVNHGGVIFKVYVVGNHVRCVKRKSLPDVSEEKVLGVSEDLLSFSQVSNLANRDSVDDDE 240

Query: 236 GVVDL----DEVEMPPIGFVEEIAKAMREETGLNLFNFDVIRDAKDGNRYLVIDINYFPG 291
               +    D  EMPP  F+ +IA  +R    LNLFNFDVIRD++ GNRYL+IDINYFPG
Sbjct: 241 KFYKMMSLDDTTEMPPQAFIVDIASGLRRAMKLNLFNFDVIRDSRYGNRYLIIDINYFPG 300

Query: 292 YAKMPNYESILTDFFLDLVGNKNSKE 317
           YAKMP YE +LTDFF+DL+  K   E
Sbjct: 301 YAKMPGYEKVLTDFFVDLMCKKELGE 326


>IMGA|Medtr5g005520.1 Ribosomal protein L19; Inositol 1, 3,
           4-trisphosphate 56-kinase chr05_pseudomolecule_IMGAG_V3
           209168-213863 E EGN_Mt090430 20090702
          Length = 322

 Score =  224 bits (571), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 193/312 (61%), Gaps = 12/312 (3%)

Query: 10  IGYALAPKKVQSFIQPSLISHANNHNIDLIPIDPSQSLVEQGPFDCIIHKLYGPDWKLQL 69
           +GYAL  KK +SF++P+ I+ A N  I  + ID ++ ++EQGPFD ++HKL G +W+  +
Sbjct: 14  VGYALTSKKKKSFLKPNFIALARNKGIFFVAIDLNKPMLEQGPFDVVLHKLPGKEWREII 73

Query: 70  ERFSLENPNVPIIDSPDSIERLHNRISMLEVVNRLNIPRRSQVLEVPKQVVVS---DSEN 126
           E +  ++P V I+D PD+I+ L NR SML+ V  LN+      + VP+Q+V++    +  
Sbjct: 74  EDYRHKHPEVTILDPPDAIQHLLNRQSMLQNVAELNLSDCHGKVGVPQQLVITKNASAST 133

Query: 127 LKGNGLIGDLGFPLVAKPLVADGSAKSHKMYQIFDTEGLKRLDAPIILQNFVNHGGVIFK 186
           +        +  PLVAKPLV DGSAKSH++   +D   L +L+ P++LQ FVNHGG++FK
Sbjct: 134 IPYEVTKAGMKLPLVAKPLVVDGSAKSHELCIAYDELSLLKLEPPLVLQEFVNHGGLLFK 193

Query: 187 VYVAGDHVQCVKRKSLPDISQEKLATLKGALSFSQISNLTARGKNSGNSGVVDLDEVEMP 246
           +Y+ G+ ++ V+R SLP++ + +L  + G   F ++S   A    S +   +D +  E P
Sbjct: 194 IYIVGETIKVVRRFSLPNVGKHELLDVDGLFRFPRVSCAAA----SADEADLDPNIAEHP 249

Query: 247 PIGFVEEIAKAMREETGLNLFNFDVIRDAKDGNRYLVIDINYFPG-----YAKMPNYESI 301
           P   +E +A+ +R   GL+LFN D+IR+    + + VIDINYFPG     Y KMP YE I
Sbjct: 250 PKPLLERLARDLRRRLGLHLFNIDMIREHGTKDVFYVIDINYFPGKYNLWYGKMPEYEQI 309

Query: 302 LTDFFLDLVGNK 313
             DF L LV NK
Sbjct: 310 FIDFLLSLVKNK 321