Jatropha Genome Database
- JcCB0223221.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0223221.10 + phase: 0 /pseudo
(269 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|AC235092_8.1 Male sterility C-terminal AC235092.1 28952-255... 296 6e-81
IMGA|AC235092_10.1 Male sterility protein AC235092.1 44793-34419... 289 8e-79
IMGA|Medtr4g072910.1 Male sterility protein 2, related chr04_pse... 225 2e-59
IMGA|Medtr5g048010.1 Male sterility protein chr05_pseudomolecule... 217 4e-57
IMGA|Medtr4g072530.1 Male sterility protein 2, related chr04_pse... 212 1e-55
IMGA|Medtr4g072270.1 Male sterility protein 2, related chr04_pse... 210 5e-55
IMGA|Medtr4g072240.1 Male sterility protein chr04_pseudomolecule... 208 2e-54
IMGA|Medtr4g069540.1 Glycoside hydrolase, chitinase active site;... 161 3e-40
IMGA|Medtr6g033470.1 Male sterility protein 2, related chr06_pse... 133 1e-31
IMGA|Medtr5g080820.1 Male sterility C-terminal chr05_pseudomolec... 132 2e-31
IMGA|Medtr4g069420.1 acyl CoA reductase-like protein, putative c... 94 5e-20
IMGA|Medtr6g033440.1 Male sterility protein 2, related chr06_pse... 60 1e-09
>IMGA|AC235092_8.1 Male sterility C-terminal AC235092.1 28952-25589
E EGN_Mt090430 20090702
Length = 227
Score = 296 bits (759), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 143/227 (62%), Positives = 180/227 (79%)
Query: 1 MELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
MEL I FLE +T+LVTGATGFLAK+F+EK+LRVQPNVKKLYLLLRA D+ S QRF N
Sbjct: 1 MELGSILHFLEGRTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAKDSESAAQRFRN 60
Query: 61 EVIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNF 120
E+IGKDLF+++KE G NS +++K+ +VPGD+S E L K+S L EE+ N D I+N
Sbjct: 61 EIIGKDLFKLLKENQGPKFNSFVSEKLTLVPGDISKEGLNLKESILEEEICNQTDVIVNL 120
Query: 121 AATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQL 180
AATT+FDERYDVALG NTLG K+VL FAK C++LK+L+HVSTAYVCGE GLI+E P++
Sbjct: 121 AATTKFDERYDVALGINTLGVKHVLSFAKKCIQLKVLVHVSTAYVCGERGGLILEDPHRY 180
Query: 181 GEALNGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
G +LNGV GL+I EKKL++ KLNQ Q +G TE +I+ AM D+G+ER
Sbjct: 181 GVSLNGVPGLDIDMEKKLVEEKLNQFQAQGTTEHDIEVAMKDLGMER 227
>IMGA|AC235092_10.1 Male sterility protein AC235092.1 44793-34419 E
EGN_Mt090430 20090702
Length = 492
Score = 289 bits (740), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 138/226 (61%), Positives = 176/226 (77%)
Query: 2 ELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYNE 61
E+ I FLE KT+LV GATGFLAK+FLEK+LRVQPNVKKL+LLLRA+D S R NE
Sbjct: 4 EVGSILNFLEGKTILVIGATGFLAKIFLEKVLRVQPNVKKLFLLLRASDDKSAASRLQNE 63
Query: 62 VIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNFA 121
++ KDLF ++ EK+G N S I++K+ +VPGD+++EDLG KDS LRE++ + D I+N A
Sbjct: 64 ILAKDLFNLLNEKMGTNFKSFISEKLTVVPGDITFEDLGLKDSILREDISSQTDVIINLA 123
Query: 122 ATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQLG 181
ATT FDERYD+AL NT G K+++ FAK C++LK+L+HVSTAYVCGE SGLI+E PY LG
Sbjct: 124 ATTNFDERYDIALDLNTFGVKHIMSFAKQCIRLKVLVHVSTAYVCGEKSGLILESPYLLG 183
Query: 182 EALNGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
++LNGV GL+I EKKL+ KL +LQ +GATE IK AM D+GI R
Sbjct: 184 DSLNGVAGLDINAEKKLVTEKLGELQEKGATEHEIKVAMKDLGITR 229
>IMGA|Medtr4g072910.1 Male sterility protein 2, related
chr04_pseudomolecule_IMGAG_V3 14206682-14210919 E
EGN_Mt090430 20090702
Length = 313
Score = 225 bits (573), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/223 (49%), Positives = 157/223 (70%), Gaps = 4/223 (1%)
Query: 9 FLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYNEVIGKDLF 68
FL+ KT+LVTGA GFLAKVF+EK+LR+QP ++KLYLLLRA++T R NEV DLF
Sbjct: 6 FLKGKTILVTGAAGFLAKVFVEKILRIQPEIQKLYLLLRASNTDLAENRLRNEVFEIDLF 65
Query: 69 RVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNFAATTRFDE 128
RV++ K G N +S I+KK+ + GDV+ E+LG KD L+ E+ ++D +++FAA+T+FDE
Sbjct: 66 RVLRAKWGENFSSFISKKVVAIAGDVAIENLGIKDEKLKREIFEEIDLLVHFAASTKFDE 125
Query: 129 RYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGES----SGLIMEKPYQLGEAL 184
R+D+ + NT GA + L AKNC ++K +H+STAYVCG++ S ++ E P+++GE+L
Sbjct: 126 RFDILMAVNTQGALHALNVAKNCKRIKAFVHISTAYVCGDAKDGDSIILRENPFEMGESL 185
Query: 185 NGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
G L+I EE L++RKL +LQ E I AM D G+ER
Sbjct: 186 KGTSKLDIHEEMNLLERKLAELQAMNVDENTITCAMKDYGMER 228
>IMGA|Medtr5g048010.1 Male sterility protein
chr05_pseudomolecule_IMGAG_V3 20270325-20265213 E
EGN_Mt090430 20090702
Length = 475
Score = 217 bits (553), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 160/230 (69%), Gaps = 3/230 (1%)
Query: 1 MELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
M + F++ KT+LVTG TGFLAKVF+EK+LR+QP ++KLYLL+RA++T + R N
Sbjct: 1 MNWGTMQNFMKGKTILVTGTTGFLAKVFVEKILRIQPEIQKLYLLVRASNTDMASHRLQN 60
Query: 61 EVIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNF 120
EV DLFRV+++ G + NS I+KK+ V GDV+ E+LG KD ++ M ++D I+N
Sbjct: 61 EVFDTDLFRVLRDDWGEDFNSFISKKVVAVAGDVAVENLGIKDQNILNVMFEEIDLIVNS 120
Query: 121 AATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGES---SGLIMEKP 177
AATT FDER+D+++G NT+GA VL AK C K+KLL+H+STAYVCGE+ + EKP
Sbjct: 121 AATTNFDERFDISMGVNTMGALQVLNIAKKCHKVKLLVHISTAYVCGEAKEEGSIFQEKP 180
Query: 178 YQLGEALNGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
+++G++L G L+I E L+++K ++L+ E +K A+ D GIER
Sbjct: 181 FEMGQSLKGTSKLDIHTEMNLLEKKFDELRAMNVDEKTLKYALKDYGIER 230
>IMGA|Medtr4g072530.1 Male sterility protein 2, related
chr04_pseudomolecule_IMGAG_V3 13947748-13949676 E
EGN_Mt090430 20090702
Length = 296
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 152/222 (68%), Gaps = 3/222 (1%)
Query: 9 FLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYNEVIGKDLF 68
FL+ KT+LVTGATGFLAKVF+EK+L +QP +KKLYLL+RA+ T R NEV DLF
Sbjct: 6 FLKGKTILVTGATGFLAKVFVEKILSIQPEIKKLYLLVRASKTDLAEHRLQNEVFEIDLF 65
Query: 69 RVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNFAATTRFDE 128
RV++ K G +S I+KK+ + GDV+ E+LG KD ++ E+ ++D +++FAA+T+FDE
Sbjct: 66 RVLRAKWGEKFSSFISKKVVAIAGDVAVENLGIKDQNILNEIFEEIDLLVHFAASTKFDE 125
Query: 129 RYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCG---ESSGLIMEKPYQLGEALN 185
R+D+++G NT G + + AKNC ++K +H+STAYVCG E L+ E P+++ ++L
Sbjct: 126 RFDISMGVNTKGPLHAMNIAKNCKRIKAFLHISTAYVCGDAKEGHTLLRETPFKMDQSLK 185
Query: 186 GVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
G L+I E L++RKL +L+ A E K AM D G+ R
Sbjct: 186 GTSKLDIHTEMNLLERKLIELKVMNADENTTKWAMKDYGMGR 227
>IMGA|Medtr4g072270.1 Male sterility protein 2, related
chr04_pseudomolecule_IMGAG_V3 13828503-13823921 E
EGN_Mt090430 20090702
Length = 335
Score = 210 bits (535), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/223 (48%), Positives = 160/223 (71%), Gaps = 4/223 (1%)
Query: 9 FLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYNEVIGKDLF 68
FL+ KT+LVTG TGFLAKVF+EK+LR+QP+++KLYLL+RA++T + R NEV DLF
Sbjct: 9 FLKGKTILVTGTTGFLAKVFVEKILRIQPDIQKLYLLIRASNTELASHRMQNEVFQTDLF 68
Query: 69 RVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNFAATTRFDE 128
RV+++KLG NS I+KK+ V GD + E+LG KD+++ M ++D I++ A TT F+E
Sbjct: 69 RVLRDKLGGGFNSFISKKVVAVAGDAAVENLGIKDNTILNVMFEEIDLIVHSAGTTNFNE 128
Query: 129 RYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGES---SGLIMEKPYQLG-EAL 184
R+D+++G NT+GA +VL AK C K+ +L+H+STAYVCGE+ + EKP+++G ++L
Sbjct: 129 RFDISMGVNTMGALHVLNVAKKCRKINVLVHISTAYVCGETKEGKPIFQEKPFEMGRQSL 188
Query: 185 NGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
L L+I E L+++KL++L+ E IK A+ D GIER
Sbjct: 189 ERTLKLDIHTEMNLLEKKLDELRAMNVDEKTIKHALKDYGIER 231
>IMGA|Medtr4g072240.1 Male sterility protein
chr04_pseudomolecule_IMGAG_V3 13816167-13811817 E
EGN_Mt090430 20090702
Length = 431
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/166 (59%), Positives = 130/166 (78%)
Query: 62 VIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNFA 121
++ KDLF+++KE GA NS I++K+ +VPGD+S E+ KDS+L +E+ N D I+N A
Sbjct: 2 ILRKDLFKLLKENHGAKFNSFISEKVTMVPGDISQENFNLKDSNLLQELYNKTDVIVNLA 61
Query: 122 ATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQLG 181
ATT FDERYDVALG NT GAK+VL FAKNC+ L++L+HVSTAYVCGE GLI+E PYQLG
Sbjct: 62 ATTNFDERYDVALGLNTFGAKHVLNFAKNCINLRVLVHVSTAYVCGERGGLIVEDPYQLG 121
Query: 182 EALNGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
+LNGV GL+I EEK++++ KLN LQ+ GATE + AM D+G+ER
Sbjct: 122 VSLNGVQGLDIDEEKRVVEEKLNMLQQAGATEKDTIIAMKDLGMER 167
>IMGA|Medtr4g069540.1 Glycoside hydrolase, chitinase active site;
Male sterility protein chr04_pseudomolecule_IMGAG_V3
13302157-13295951 E EGN_Mt090430 20090702
Length = 386
Score = 161 bits (407), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 112/166 (67%), Gaps = 22/166 (13%)
Query: 62 VIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNFA 121
+IGKDLF+ +KEKLGAN + +++K+ +VPGD+S EDLG +DS L+EE+ N +D I+N A
Sbjct: 9 IIGKDLFKCLKEKLGANFTTFLSEKLTLVPGDISLEDLGLEDSILKEEIHNQIDVIVNLA 68
Query: 122 ATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQLG 181
A T FDE KLK+L+HVSTAYVCGE GLI+EKPY LG
Sbjct: 69 ANTNFDESN----------------------KLKVLVHVSTAYVCGEGEGLILEKPYHLG 106
Query: 182 EALNGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIER 227
+LNGV GL++ E+K++ KL +LQ+ GATE IK AM ++GI R
Sbjct: 107 HSLNGVNGLDVDIEEKVVRDKLCELQQLGATEDEIKMAMKNLGISR 152
>IMGA|Medtr6g033470.1 Male sterility protein 2, related
chr06_pseudomolecule_IMGAG_V3 7405302-7404412 H
EGN_Mt090430 20090702
Length = 129
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 92/129 (71%)
Query: 1 MELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
MEL + +F KT+LVTG TGFL KVF+EK+LRVQP++KKLYLL+R+ + QR +
Sbjct: 1 MELGDVQEFFAGKTILVTGVTGFLGKVFVEKMLRVQPDIKKLYLLIRSPNIGLATQRLHV 60
Query: 61 EVIGKDLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNF 120
EV K+LF+V + + GA+ +S I++K+ V GDVS E LG KD EEM+ ++D I++
Sbjct: 61 EVFRKELFKVQRAEKGADFDSFISEKVVAVVGDVSLEMLGVKDVKRNEEMLKEIDIIVHS 120
Query: 121 AATTRFDER 129
AATT+ D+R
Sbjct: 121 AATTKLDDR 129
>IMGA|Medtr5g080820.1 Male sterility C-terminal
chr05_pseudomolecule_IMGAG_V3 30289688-30290609 H
EGN_Mt090430 20090702
Length = 128
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 92/124 (74%), Gaps = 2/124 (1%)
Query: 6 ITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYNEVIGK 65
I FL+ K++LV G TGFLAKVF+EK+LR+QP +++LYLL+RA++ +QR NEV
Sbjct: 6 IHSFLKGKSILVIGTTGFLAKVFVEKILRIQPEIQQLYLLVRASNNDLASQRLQNEVFQT 65
Query: 66 DLFRVVKEKLGANLNSIIAKKIAIVPGDVSYEDLGAKDSSLREEMINDLDFILNFAATTR 125
DLF ++++KLG +S I+KK+ + GDVS ++LG KD +L + ++D I+NFAATT+
Sbjct: 66 DLFGLLRDKLGQEFDSFISKKVTAIAGDVSVQNLGLKDENL--NLFQEIDLIVNFAATTK 123
Query: 126 FDER 129
FDER
Sbjct: 124 FDER 127
>IMGA|Medtr4g069420.1 acyl CoA reductase-like protein, putative
chr04_pseudomolecule_IMGAG_V3 13245835-13245528 E
EGN_Mt090430 20090702
Length = 64
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 52/62 (83%)
Query: 1 MELEKITQFLEHKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
MEL + FL+ KT+L+TGATGFLAK+ LEK+LRVQPNVKKLYLLLRA+D S + RF+N
Sbjct: 1 MELGSVLHFLQDKTILITGATGFLAKILLEKILRVQPNVKKLYLLLRASDAKSASHRFHN 60
Query: 61 EV 62
EV
Sbjct: 61 EV 62
>IMGA|Medtr6g033440.1 Male sterility protein 2, related
chr06_pseudomolecule_IMGAG_V3 7398828-7397767 E
EGN_Mt090430 20090702
Length = 140
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 157 LIHVST-AYVCGESSGLIMEKPYQLGEAL-NGVLGLNIVEEKKLIDRKLNQLQREGATEA 214
LI + T +YVCGE GL++EKP+ +G+ L G L L+I EKKLI+ K+++L+ E A E
Sbjct: 8 LIWIWTRSYVCGEPKGLVIEKPFFMGQTLKGGSLKLDIKLEKKLIEEKISELKAENANEE 67
Query: 215 NIKKAMIDMGIER 227
I M + G+ R
Sbjct: 68 TINSVMKNFGMIR 80