Jatropha Genome Database

JcCB0220081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0220081.10 - phase: 0 /partial
         (296 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g110470.2 IspG protein; Dihydropteroate synthase-like...   517   e-147
IMGA|Medtr2g110470.1 IspG protein; Dihydropteroate synthase-like...   516   e-147

>IMGA|Medtr2g110470.2 IspG protein; Dihydropteroate synthase-like
           chr02_pseudomolecule_IMGAG_V3 25973011-25967013 E
           EGN_Mt090430 20090702
          Length = 704

 Score =  517 bits (1331), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/296 (84%), Positives = 269/296 (90%)

Query: 1   DLATVDSILLRELPPVEDSDARLALKRLIDISMGVITPLSEQLTKPLPNAMVLVNLKEIA 60
           DLATVDSILLRELPPV+D DARLALKRL DISMGVITPLSEQLTKPLPNA+VLVNLKE++
Sbjct: 409 DLATVDSILLRELPPVDDVDARLALKRLNDISMGVITPLSEQLTKPLPNAIVLVNLKELS 468

Query: 61  TGAYKLLPEGTRLVVSVRGDESYEELEILKDIDATMILHDLPFTEDKIGRVHAARRLFEF 120
           TGA+KLLP+GTRLVVSVRGDE YEELEILKD+DATM+LHDLP+TED+I RVHAARRLFE+
Sbjct: 469 TGAHKLLPQGTRLVVSVRGDEPYEELEILKDVDATMLLHDLPYTEDRISRVHAARRLFEY 528

Query: 121 LSDHALNFPVIHHIQFPNAIHRDDLVIGAGTNXXXXXXXXXXXXXXXEAPGQDFDFLRNT 180
           LSD++L+FPVIHHIQFPN IHRDDLVIGAG++               EA  +DFDFLRNT
Sbjct: 529 LSDNSLDFPVIHHIQFPNGIHRDDLVIGAGSHAGALLVDGLGDGLLLEASDKDFDFLRNT 588

Query: 181 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG 240
           SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG
Sbjct: 589 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG 648

Query: 241 EMADADFGYVGGAPGKIDLYVGKTVVKRGIDMEGATDALIQLIKDHGRWVDPPAEE 296
           EMADADFGYVGGAPGKIDLYVGKTVVKR I ME ATDALI LIK+HGRWVDPP EE
Sbjct: 649 EMADADFGYVGGAPGKIDLYVGKTVVKRAIAMEQATDALIDLIKEHGRWVDPPVEE 704


>IMGA|Medtr2g110470.1 IspG protein; Dihydropteroate synthase-like
           chr02_pseudomolecule_IMGAG_V3 25973011-25967013 E
           EGN_Mt090430 20090702
          Length = 740

 Score =  516 bits (1330), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/296 (84%), Positives = 269/296 (90%)

Query: 1   DLATVDSILLRELPPVEDSDARLALKRLIDISMGVITPLSEQLTKPLPNAMVLVNLKEIA 60
           DLATVDSILLRELPPV+D DARLALKRL DISMGVITPLSEQLTKPLPNA+VLVNLKE++
Sbjct: 445 DLATVDSILLRELPPVDDVDARLALKRLNDISMGVITPLSEQLTKPLPNAIVLVNLKELS 504

Query: 61  TGAYKLLPEGTRLVVSVRGDESYEELEILKDIDATMILHDLPFTEDKIGRVHAARRLFEF 120
           TGA+KLLP+GTRLVVSVRGDE YEELEILKD+DATM+LHDLP+TED+I RVHAARRLFE+
Sbjct: 505 TGAHKLLPQGTRLVVSVRGDEPYEELEILKDVDATMLLHDLPYTEDRISRVHAARRLFEY 564

Query: 121 LSDHALNFPVIHHIQFPNAIHRDDLVIGAGTNXXXXXXXXXXXXXXXEAPGQDFDFLRNT 180
           LSD++L+FPVIHHIQFPN IHRDDLVIGAG++               EA  +DFDFLRNT
Sbjct: 565 LSDNSLDFPVIHHIQFPNGIHRDDLVIGAGSHAGALLVDGLGDGLLLEASDKDFDFLRNT 624

Query: 181 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG 240
           SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG
Sbjct: 625 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG 684

Query: 241 EMADADFGYVGGAPGKIDLYVGKTVVKRGIDMEGATDALIQLIKDHGRWVDPPAEE 296
           EMADADFGYVGGAPGKIDLYVGKTVVKR I ME ATDALI LIK+HGRWVDPP EE
Sbjct: 685 EMADADFGYVGGAPGKIDLYVGKTVVKRAIAMEQATDALIDLIKEHGRWVDPPVEE 740