Jatropha Genome Database

JcCB0213661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0213661.10 + phase: 0 /partial
         (125 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC225519_21.1 Heavy metal transport/detoxification protein ...    90   2e-19
IMGA|AC202568_18.1 Heavy metal transport/detoxification protein ...    66   3e-12

>IMGA|AC225519_21.1 Heavy metal transport/detoxification protein
           AC225519.5 92933-94445 H EGN_Mt090430 20090702
          Length = 265

 Score = 90.1 bits (222), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 69/131 (52%), Gaps = 7/131 (5%)

Query: 1   SDLHEWLLKHKGIFNVKTDIKTQNLTVEGTIESDKLLAYIRKKVHRNAXXXX---XXXXX 57
           +DL   L+KHKGIFNVKTD K Q+L VEGTIE +KL ++++K+VH+NA            
Sbjct: 134 ADLKRRLIKHKGIFNVKTDKKAQSLIVEGTIEVEKLTSFLKKRVHKNAEVISIKEHKREE 193

Query: 58  XXXXXXXXXXXXXXXXXXXXXXXXXXIEF---KAEKKVEAITKEGN-APYFVHYVYAPQL 113
                                     IE      + + E   K+ N  PY +HYVYAPQL
Sbjct: 194 KKEKGKEEEEKKEKGKEEEKKDKGKVIEIHHGGGDTRDEIKIKDNNNVPYIIHYVYAPQL 253

Query: 114 FSDENPNACII 124
           FSDENPN+C I
Sbjct: 254 FSDENPNSCSI 264


>IMGA|AC202568_18.1 Heavy metal transport/detoxification protein
           AC202568.9 85002-86374 H EGN_Mt090430 20090702
          Length = 218

 Score = 66.2 bits (160), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 40/48 (83%)

Query: 1   SDLHEWLLKHKGIFNVKTDIKTQNLTVEGTIESDKLLAYIRKKVHRNA 48
           +DL   L+KHKGIFNVKTD K Q+L VEGTIE +KL ++++K+VH+NA
Sbjct: 134 ADLKRRLIKHKGIFNVKTDKKAQSLIVEGTIEVEKLTSFLKKRVHKNA 181