Jatropha Genome Database

JcCB0212401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0212401.10 - phase: 0 
         (155 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g161000.1 Cytidylyltransferase chr04_pseudomolecule_I...   195   9e-51
IMGA|Medtr7g081050.1 Cytidylyltransferase chr07_pseudomolecule_I...   167   1e-42
IMGA|Medtr7g081050.2 Cytidylyltransferase chr07_pseudomolecule_I...   167   2e-42
IMGA|Medtr4g089770.1 Cytidylyltransferase chr04_pseudomolecule_I...    67   2e-12
IMGA|Medtr4g084450.1 Cytidylyltransferase chr04_pseudomolecule_I...    48   2e-06

>IMGA|Medtr4g161000.1 Cytidylyltransferase
           chr04_pseudomolecule_IMGAG_V3 41001899-40997817 E
           EGN_Mt090430 20090702
          Length = 418

 Score =  195 bits (495), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 95/133 (71%), Positives = 112/133 (84%), Gaps = 4/133 (3%)

Query: 12  KLALVSGLKWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGTDAYALAKR 71
           +LALVSGLKWVDEVI ++PYAITE F+N LF+E+ IDY+IHGDDPCLLPDGTDAYA AK+
Sbjct: 118 RLALVSGLKWVDEVITDAPYAITETFLNRLFHEYNIDYVIHGDDPCLLPDGTDAYAAAKK 177

Query: 72  AGRYKQIKRTEGVSSTDIVGRIL-SVDDPKVCEAHDDKLPLPRDACKANQSSGAYISQFL 130
           AGRYKQIKRTEGVSSTDIVGRI+ S+ + K+CE  +     P++ C   QS  ++ISQFL
Sbjct: 178 AGRYKQIKRTEGVSSTDIVGRIMSSLKEQKICEDRNGTDVKPQEEC---QSKVSHISQFL 234

Query: 131 PTSRRIVQFSNGK 143
           PTSRRIVQFSNGK
Sbjct: 235 PTSRRIVQFSNGK 247


>IMGA|Medtr7g081050.1 Cytidylyltransferase
           chr07_pseudomolecule_IMGAG_V3 17421819-17413564 E
           EGN_Mt090430 20090702
          Length = 419

 Score =  167 bits (424), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 85/142 (59%), Positives = 104/142 (73%), Gaps = 10/142 (7%)

Query: 12  KLALVSGLKWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGTDAYALAKR 71
           +L +V+ +KWVDEVI  +PYAITE+FM  LF+E+ IDYIIHGDDPC+LPDGTDAYA AK+
Sbjct: 105 RLIMVNAVKWVDEVIPEAPYAITEEFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYAHAKK 164

Query: 72  AGRYKQIKRTEGVSSTDIVGR-ILSVDDPKVCEAHD-DKLPLPRDACKANQ--------S 121
           AGRYKQIKRTEGVSSTDIVGR +L V +  + + H+   L       +  Q        +
Sbjct: 165 AGRYKQIKRTEGVSSTDIVGRMLLCVRERNIADTHNHSSLQRQFSNGRGQQKFEDGGVVA 224

Query: 122 SGAYISQFLPTSRRIVQFSNGK 143
           SG  +S FLPTSRRIVQFSNG+
Sbjct: 225 SGTRVSHFLPTSRRIVQFSNGR 246


>IMGA|Medtr7g081050.2 Cytidylyltransferase
           chr07_pseudomolecule_IMGAG_V3 17421819-17416592 E
           EGN_Mt090430 20090702
          Length = 355

 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 85/142 (59%), Positives = 104/142 (73%), Gaps = 10/142 (7%)

Query: 12  KLALVSGLKWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGTDAYALAKR 71
           +L +V+ +KWVDEVI  +PYAITE+FM  LF+E+ IDYIIHGDDPC+LPDGTDAYA AK+
Sbjct: 105 RLIMVNAVKWVDEVIPEAPYAITEEFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYAHAKK 164

Query: 72  AGRYKQIKRTEGVSSTDIVGR-ILSVDDPKVCEAHD-DKLPLPRDACKANQ--------S 121
           AGRYKQIKRTEGVSSTDIVGR +L V +  + + H+   L       +  Q        +
Sbjct: 165 AGRYKQIKRTEGVSSTDIVGRMLLCVRERNIADTHNHSSLQRQFSNGRGQQKFEDGGVVA 224

Query: 122 SGAYISQFLPTSRRIVQFSNGK 143
           SG  +S FLPTSRRIVQFSNG+
Sbjct: 225 SGTRVSHFLPTSRRIVQFSNGR 246


>IMGA|Medtr4g089770.1 Cytidylyltransferase
           chr04_pseudomolecule_IMGAG_V3 18782117-18786930 F
           EGN_Mt090430 20090702
          Length = 285

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 6/77 (7%)

Query: 20  KWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGT--DAYALAKRAGRYKQ 77
           KWVDEVI + P+ I ++F++    +HKIDY+ H   P     G   D Y   K  G++K+
Sbjct: 79  KWVDEVIPDVPWVINQEFID----KHKIDYVAHDALPYADTSGAGNDVYEFVKAIGKFKE 134

Query: 78  IKRTEGVSSTDIVGRIL 94
            KRTEG+S++DI+ RI+
Sbjct: 135 TKRTEGISTSDIIMRII 151


>IMGA|Medtr4g084450.1 Cytidylyltransferase
           chr04_pseudomolecule_IMGAG_V3 17752517-17751148 E
           EGN_Mt090430 20090702
          Length = 341

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 6/64 (9%)

Query: 20  KWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGT--DAYALAKRAGRYKQ 77
           KWVDEVI + P+ I ++F+    ++HKIDY+     P     G   D Y   K  G++K+
Sbjct: 58  KWVDEVIPDVPWVINQEFI----DKHKIDYVAQDALPYADTSGAGKDVYEFVKAIGKFKE 113

Query: 78  IKRT 81
            KRT
Sbjct: 114 TKRT 117