Jatropha Genome Database

JcCB0207431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0207431.10 + phase: 2 /partial
         (135 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g106630.1 Sterol desaturase chr08_pseudomolecule_IMGA...   213   2e-56
IMGA|Medtr8g073640.1 Sterol desaturase chr08_pseudomolecule_IMGA...   133   2e-32
IMGA|Medtr5g036470.2 Sterol desaturase chr05_pseudomolecule_IMGA...   132   6e-32
IMGA|Medtr5g036470.1 Sterol desaturase chr05_pseudomolecule_IMGA...   131   8e-32

>IMGA|Medtr8g106630.1 Sterol desaturase
           chr08_pseudomolecule_IMGAG_V3 23972783-23976296 E
           EGN_Mt090430 20090702
          Length = 303

 Score =  213 bits (543), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 98/129 (75%), Positives = 112/129 (86%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
            LH+KWGYEKIH VHH+Y APIG AAPYAHWAEILILG P+FLGPA+VPGH+IT+WLW  
Sbjct: 147 FLHNKWGYEKIHRVHHEYQAPIGFAAPYAHWAEILILGIPSFLGPAMVPGHMITFWLWIA 206

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           LRQ+EAI+THSGYD   + TKYIPFYGGAE+HDYHH VG QSQSNFAS+FTYCDYIYGTD
Sbjct: 207 LRQVEAIDTHSGYDFPWNPTKYIPFYGGAEHHDYHHYVGGQSQSNFASVFTYCDYIYGTD 266

Query: 121 KVSKTRNEI 129
           K  + + +I
Sbjct: 267 KGFRYQKKI 275


>IMGA|Medtr8g073640.1 Sterol desaturase
           chr08_pseudomolecule_IMGAG_V3 14429368-14432468 E
           EGN_Mt090430 20090702
          Length = 271

 Score =  133 bits (335), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 90/139 (64%), Gaps = 5/139 (3%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
           +LH+KW Y+ +H VHH+Y  P GL + YAH AEIL LGF   +GPA+   H+IT WLW +
Sbjct: 129 ILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLITLWLWMV 188

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           LR +E +E H GY    S + ++P YGG+++HDYHH +      N++S FTY D I+GTD
Sbjct: 189 LRVLETVEAHCGYHFPWSPSNFLPLYGGSDFHDYHHRLLYTKSGNYSSTFTYMDRIFGTD 248

Query: 121 ----KVSKTRN-EIEVTVQ 134
               K+   +N E+E + +
Sbjct: 249 IGYRKLKALKNAEVEYSSE 267


>IMGA|Medtr5g036470.2 Sterol desaturase
           chr05_pseudomolecule_IMGAG_V3 15196033-15197805 F
           EGN_Mt090430 20090702
          Length = 217

 Score =  132 bits (332), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 81/120 (67%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
           +LH+KW Y+ IH VHH+Y  P GL + YAH AEIL LGF   +GPA+   H+IT WLW +
Sbjct: 75  ILHTKWLYKHIHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLITLWLWMV 134

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           +R +E +E H GY    S + ++P YGG+++HDYHH +      N++S FTY D I+GTD
Sbjct: 135 VRVLETVEAHCGYHFPWSPSNFLPLYGGSDFHDYHHRLLYTKSGNYSSTFTYMDRIFGTD 194


>IMGA|Medtr5g036470.1 Sterol desaturase
           chr05_pseudomolecule_IMGAG_V3 15194182-15197805 F
           EGN_Mt090430 20090702
          Length = 271

 Score =  131 bits (330), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 81/120 (67%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
           +LH+KW Y+ IH VHH+Y  P GL + YAH AEIL LGF   +GPA+   H+IT WLW +
Sbjct: 129 ILHTKWLYKHIHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLITLWLWMV 188

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           +R +E +E H GY    S + ++P YGG+++HDYHH +      N++S FTY D I+GTD
Sbjct: 189 VRVLETVEAHCGYHFPWSPSNFLPLYGGSDFHDYHHRLLYTKSGNYSSTFTYMDRIFGTD 248