Jatropha Genome Database

JcCB0205061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0205061.10 + phase: 0 
         (95 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g099570.1 Lipoxygenase; Lipase/lipooxygenase, PLAT/LH...    77   2e-15
IMGA|Medtr1g132610.1 Lipoxygenase; Lipase/lipooxygenase, PLAT/LH...    61   1e-10
IMGA|Medtr7g139190.1 Lipoxygenase; Lipase/lipooxygenase, PLAT/LH...    58   1e-09

>IMGA|Medtr1g099570.1 Lipoxygenase; Lipase/lipooxygenase, PLAT/LH2
          chr01_pseudomolecule_IMGAG_V3 20382791-20389167 E
          EGN_Mt090430 20090702
          Length = 832

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 11/83 (13%)

Query: 1  MLQNIVGAITGDSNGSKKIKCVSGECKKITGSVVLMKKNVLDFNDFHASLLDRVHELFGH 60
          ML NI+ A TGD +   +++          G+VVLMKK+VLDFNDF AS+LD +HE  G 
Sbjct: 1  MLHNILNAFTGDKSNRHQVE----------GTVVLMKKSVLDFNDFTASMLDGLHEFVGK 50

Query: 61 GVSLQLISSVTSESGKFLFLISF 83
          GVSLQL+S+V ++S +  F +SF
Sbjct: 51 GVSLQLVSTVNTDS-ESTFKVSF 72


>IMGA|Medtr1g132610.1 Lipoxygenase; Lipase/lipooxygenase, PLAT/LH2
          chr01_pseudomolecule_IMGAG_V3 29642232-29635854 E
          EGN_Mt090430 20090702
          Length = 856

 Score = 60.8 bits (146), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/50 (54%), Positives = 37/50 (74%)

Query: 29 ITGSVVLMKKNVLDFNDFHASLLDRVHELFGHGVSLQLISSVTSESGKFL 78
          + G VVLMKK++LDF+D  +++LDR+HE  G GVSLQLIS+   +  K L
Sbjct: 9  VKGKVVLMKKSLLDFHDIKSNVLDRIHEFLGKGVSLQLISATAPDPAKGL 58


>IMGA|Medtr7g139190.1 Lipoxygenase; Lipase/lipooxygenase, PLAT/LH2
          chr07_pseudomolecule_IMGAG_V3 33231893-33225642 E
          EGN_Mt090430 20090702
          Length = 886

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 7/70 (10%)

Query: 6  VGAITGDSNGSKKIKCVSGECKKITGSVVLMKKNVLDFNDFHASLLDRVHELFGHGVSLQ 65
          V +I  D+N +K  + + GE       V+LMKKNVLDF D  AS  D +HEL G  VSLQ
Sbjct: 3  VLSIHDDNNKNKNDRIMRGE-------VILMKKNVLDFKDLSASFFDGIHELVGKRVSLQ 55

Query: 66 LISSVTSESG 75
          L+S+   + G
Sbjct: 56 LVSADKGDPG 65