Jatropha Genome Database

JcCB0203341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0203341.10 + phase: 0 /partial
         (127 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g026300.1 Arginase/agmatinase/formiminoglutamase chr0...   218   9e-58
IMGA|Medtr4g026070.1 Arginase/agmatinase/formiminoglutamase chr0...   200   1e-52
IMGA|Medtr4g026100.1 Arginase/agmatinase/formiminoglutamase chr0...   176   3e-45
IMGA|Medtr4g026380.1 Arginase/agmatinase/formiminoglutamase chr0...   142   4e-35

>IMGA|Medtr4g026300.1 Arginase/agmatinase/formiminoglutamase
           chr04_pseudomolecule_IMGAG_V3 6411400-6407159 E
           EGN_Mt090430 20090702
          Length = 327

 Score =  218 bits (554), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 107/127 (84%), Positives = 110/127 (86%)

Query: 1   RPFQGGFGSITKEGRGQGKRFGVDQYEMGPFSRDPQLLENLKLGEGAKGVYISIDVDCLD 60
           R  Q G  SIT EGR Q K+FGV+QYEM  FSRD   LENLKLGEG KGVYISIDVDCLD
Sbjct: 201 RLLQVGIRSITTEGRAQAKKFGVEQYEMRTFSRDRHFLENLKLGEGVKGVYISIDVDCLD 260

Query: 61  PAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRE 120
           PAFAPGVSHIEPGGLSFRDVLNILHNLQ DVVA DVVEFNPQRDTVDGMTAMVAAKLVRE
Sbjct: 261 PAFAPGVSHIEPGGLSFRDVLNILHNLQGDVVAGDVVEFNPQRDTVDGMTAMVAAKLVRE 320

Query: 121 LTAKISK 127
           L AKI+K
Sbjct: 321 LAAKIAK 327


>IMGA|Medtr4g026070.1 Arginase/agmatinase/formiminoglutamase
           chr04_pseudomolecule_IMGAG_V3 6328452-6324222 E
           EGN_Mt090430 20090702
          Length = 318

 Score =  200 bits (509), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/127 (77%), Positives = 106/127 (83%)

Query: 1   RPFQGGFGSITKEGRGQGKRFGVDQYEMGPFSRDPQLLENLKLGEGAKGVYISIDVDCLD 60
           R  +G +     +   + K+FGV+QYEM  FSRD   LENLKLGEG KGVYISIDVDCLD
Sbjct: 192 RVMEGNYVRRLLQDAHKQKKFGVEQYEMRTFSRDRHFLENLKLGEGVKGVYISIDVDCLD 251

Query: 61  PAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRE 120
           PAFAPGVSHIEPGGLSFRDVLNILHNLQ DVVA DVVEFNPQRDTVDGMTAMVAAKLVRE
Sbjct: 252 PAFAPGVSHIEPGGLSFRDVLNILHNLQGDVVAGDVVEFNPQRDTVDGMTAMVAAKLVRE 311

Query: 121 LTAKISK 127
           L AKI+K
Sbjct: 312 LAAKIAK 318


>IMGA|Medtr4g026100.1 Arginase/agmatinase/formiminoglutamase
           chr04_pseudomolecule_IMGAG_V3 6337172-6334716 E
           EGN_Mt090430 20090702
          Length = 222

 Score =  176 bits (446), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 87/127 (68%), Positives = 101/127 (79%)

Query: 1   RPFQGGFGSITKEGRGQGKRFGVDQYEMGPFSRDPQLLENLKLGEGAKGVYISIDVDCLD 60
           R  Q G  SIT + R Q K++GV+ +EM   SRD  +LENLKLGEG KGVY+SIDVD LD
Sbjct: 96  RLVQVGIRSITNDVREQVKKYGVETHEMRTLSRDRPILENLKLGEGVKGVYVSIDVDSLD 155

Query: 61  PAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRE 120
           P+ APGVSH EPGGL FRD+LNIL NLQ D+V  DVVE+NPQRDT DG+TA+VAAKLVRE
Sbjct: 156 PSIAPGVSHHEPGGLLFRDILNILQNLQGDIVGGDVVEYNPQRDTYDGITALVAAKLVRE 215

Query: 121 LTAKISK 127
           L AK+SK
Sbjct: 216 LAAKMSK 222


>IMGA|Medtr4g026380.1 Arginase/agmatinase/formiminoglutamase
           chr04_pseudomolecule_IMGAG_V3 6430546-6431040 H
           EGN_Mt090430 20090702
          Length = 102

 Score =  142 bits (358), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 68/90 (75%), Positives = 77/90 (85%)

Query: 38  LENLKLGEGAKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVV 97
           L+  KLGEG KGVY+SIDVD LDP+ APGVSH EPGGL FRD+LNIL NLQ D+V  DVV
Sbjct: 13  LDQKKLGEGVKGVYVSIDVDSLDPSIAPGVSHHEPGGLLFRDILNILQNLQGDIVGGDVV 72

Query: 98  EFNPQRDTVDGMTAMVAAKLVRELTAKISK 127
           E+NPQRDT DG+TA+VAAKLVREL AK+SK
Sbjct: 73  EYNPQRDTYDGITALVAAKLVRELAAKMSK 102