Jatropha Genome Database

JcCB0194971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0194971.10 - phase: 0 /pseudo
         (175 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g077840.1 Aminotransferase class-III; chr07_pseudomol...   213   4e-56
IMGA|Medtr4g140630.1 Peptidase S1 and S6, chymotrypsin/Hap; Amin...   186   6e-48
IMGA|Medtr8g042610.1 Peptidase S1 and S6, chymotrypsin/Hap; Amin...   185   8e-48

>IMGA|Medtr7g077840.1 Aminotransferase class-III;
           chr07_pseudomolecule_IMGAG_V3 16494483-16487506 E
           EGN_Mt090430 20090702
          Length = 481

 Score =  213 bits (542), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 98/158 (62%), Positives = 121/158 (76%), Gaps = 3/158 (1%)

Query: 1   MQRFVAKRLLSGRSSLSIHRCFSQLAQNEASVLDNDALIPK-MPPFDYSPPPYTGPSSEE 59
           + RF+ +R    +S     R  SQ A       DN A  P  +PPFDY PP Y+GPS + 
Sbjct: 6   LARFLLRRSPPPQSQFIFQRGISQSAAERTK--DNVAAEPPVLPPFDYVPPSYSGPSGDH 63

Query: 60  IMTKRKEFLSPSLFHFYKKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPDIID 119
           ++ KR+E+LSPS+ HFYK PLN+V+GK QYLFDENGRRY+DAFGGIATVCCGHCHPD++ 
Sbjct: 64  VLAKRREYLSPSIMHFYKSPLNIVEGKKQYLFDENGRRYVDAFGGIATVCCGHCHPDVVS 123

Query: 120 SIVNQIKRLQHSTVLYLNHAIADFAEALASKMPGNLKV 157
           +IV+Q K+LQHSTVLYLNHA+ADFAEALA K+PG+LKV
Sbjct: 124 AIVDQTKKLQHSTVLYLNHAVADFAEALAGKLPGDLKV 161


>IMGA|Medtr4g140630.1 Peptidase S1 and S6, chymotrypsin/Hap;
           Aminotransferase class-III;
           chr04_pseudomolecule_IMGAG_V3 34556847-34553328 F
           EGN_Mt090430 20090702
          Length = 481

 Score =  186 bits (471), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 81/113 (71%), Positives = 98/113 (86%)

Query: 45  FDYSPPPYTGPSSEEIMTKRKEFLSPSLFHFYKKPLNVVDGKMQYLFDENGRRYLDAFGG 104
           FD+ P PY GPS++E+ +KRK+FL PSLFHFY+KPLN+V+GKMQYL+DE GRRYLDAF G
Sbjct: 49  FDHQPHPYYGPSADEVFSKRKQFLGPSLFHFYQKPLNIVEGKMQYLYDEAGRRYLDAFAG 108

Query: 105 IATVCCGHCHPDIIDSIVNQIKRLQHSTVLYLNHAIADFAEALASKMPGNLKV 157
           I TV  GHCHPDI+++I  Q K LQH+T +YL+HAIADFAEALA+KMPGNLKV
Sbjct: 109 IVTVSAGHCHPDILNAIFEQSKLLQHATTIYLHHAIADFAEALAAKMPGNLKV 161


>IMGA|Medtr8g042610.1 Peptidase S1 and S6, chymotrypsin/Hap;
           Aminotransferase class-III;
           chr08_pseudomolecule_IMGAG_V3 8889030-8892366 E
           EGN_Mt090430 20090702
          Length = 452

 Score =  185 bits (470), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 81/113 (71%), Positives = 98/113 (86%)

Query: 45  FDYSPPPYTGPSSEEIMTKRKEFLSPSLFHFYKKPLNVVDGKMQYLFDENGRRYLDAFGG 104
           FD+ P PY GPS++E+ +KRK+FL PSLFHFY+KPLN+V+GKMQYL+DE GRRYLDAF G
Sbjct: 49  FDHQPHPYYGPSADEVFSKRKQFLGPSLFHFYQKPLNIVEGKMQYLYDEAGRRYLDAFAG 108

Query: 105 IATVCCGHCHPDIIDSIVNQIKRLQHSTVLYLNHAIADFAEALASKMPGNLKV 157
           I TV  GHCHPDI+++I  Q K LQH+T +YL+HAIADFAEALA+KMPGNLKV
Sbjct: 109 IVTVSAGHCHPDILNAIFEQSKLLQHATTIYLHHAIADFAEALAAKMPGNLKV 161