Jatropha Genome Database

JcCB0191431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0191431.10 + phase: 2 /partial
         (141 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC225517_25.1 Glycosyl transferase, family 43 AC225517.6 11...   176   3e-45
IMGA|Medtr3g127830.1 Glycosyl transferase, family 43 chr03_pseud...   165   8e-42
IMGA|Medtr7g120990.1 Glycosyl transferase, family 43 chr07_pseud...    81   2e-16

>IMGA|AC225517_25.1 Glycosyl transferase, family 43 AC225517.6
           110047-106863 E EGN_Mt090430 20090702
          Length = 479

 Score =  176 bits (446), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 81/137 (59%), Positives = 102/137 (74%), Gaps = 3/137 (2%)

Query: 1   RFGTWTVAKVMGQSKG-FLDGPVCNGTRVIGWHVNEXXXXXXXXXXXHVDMSGFAFNSTI 59
           RFGTWTVA++     G  L GP+CNG+ VIGWH N            H +M GFAFNSTI
Sbjct: 297 RFGTWTVARLSKDRSGILLQGPICNGSEVIGWHTNNESGGNSKRF--HAEMQGFAFNSTI 354

Query: 60  LWDPKRWHRPTIEPIRLLDTVRDGFQVSTIIEQVVEDESQMEGLLQDCSRVMVWHLQLES 119
           LWDPK+WHRP+++PIR L++V++   VST+IEQ+V+DES+MEGL+ DCSRVMVW++ LES
Sbjct: 355 LWDPKKWHRPSLKPIRQLESVKENLWVSTLIEQIVKDESEMEGLMNDCSRVMVWNIDLES 414

Query: 120 SNPFYPPKWFTISNLDV 136
           S  FYP KW T +NLDV
Sbjct: 415 SYSFYPKKWITENNLDV 431


>IMGA|Medtr3g127830.1 Glycosyl transferase, family 43
           chr03_pseudomolecule_IMGAG_V3 32500418-32497183 F
           EGN_Mt090430 20090702
          Length = 441

 Score =  165 bits (417), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 79/141 (56%), Positives = 94/141 (66%), Gaps = 4/141 (2%)

Query: 1   RFGTWTVAKVM-GQSKGFLDGPVCNGTRVIGWHVNEXXXXXXXXXXXHVDMSGFAFNSTI 59
           RFGTW VA +   ++K  L+GPVCNG++V+GWH NE           HVDMSGFAFNSTI
Sbjct: 303 RFGTWPVAMLAPSKNKAILEGPVCNGSQVLGWHTNEKSKRLRRF---HVDMSGFAFNSTI 359

Query: 60  LWDPKRWHRPTIEPIRLLDTVRDGFQVSTIIEQVVEDESQMEGLLQDCSRVMVWHLQLES 119
           LWDPKRW RPT  PIR LD+V++GFQ +T IEQ+VEDESQMEG    C ++M WHL L  
Sbjct: 360 LWDPKRWRRPTSNPIRQLDSVKEGFQETTFIEQLVEDESQMEGSPPGCKKIMNWHLHLNV 419

Query: 120 SNPFYPPKWFTISNLDVTAQL 140
            N  YP  W    NLD    +
Sbjct: 420 HNIVYPKGWMLEKNLDAVIHI 440


>IMGA|Medtr7g120990.1 Glycosyl transferase, family 43
           chr07_pseudomolecule_IMGAG_V3 28393985-28390609 E
           EGN_Mt090430 20090702
          Length = 338

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 14/119 (11%)

Query: 2   FGTWTVAKVMGQSKG-FLDGPVCNGTRVIGWHVNEXXXXXXXXXXXHVDMSGFAFNSTIL 60
           FGTW  A ++   K   ++GPVC+ ++VIGWH+              + +S FAFNS+IL
Sbjct: 222 FGTWPTALLLANRKRVIIEGPVCDSSQVIGWHLRSMNNETITSP---IHISSFAFNSSIL 278

Query: 61  WDPKRWHRPTIEPIRLLDTVRDGFQVS-TIIEQVV-EDESQMEGLLQDCSRVMVWHLQL 117
           WDP+RW R +        +V+D  Q S   ++QVV EDE++++G+   CS++++W    
Sbjct: 279 WDPERWGRTS--------SVKDTSQNSIKFVKQVVLEDEAKLKGIPPYCSKILLWRFNF 329