Jatropha Genome Database

JcCB0190821.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0190821.20 - phase: 2 /partial
         (66 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g158980.3 Protein of unknown function DUF502 chr04_ps...    72   9e-14
IMGA|Medtr4g158980.2 Protein of unknown function DUF502 chr04_ps...    70   2e-13
IMGA|Medtr4g159280.1 Protein of unknown function DUF502 chr04_ps...    70   2e-13
IMGA|Medtr4g158980.1 Protein of unknown function DUF502 chr04_ps...    70   2e-13
IMGA|Medtr4g159250.1 Protein of unknown function DUF502 chr04_ps...    70   3e-13
IMGA|Medtr4g158960.1 Protein of unknown function DUF502 chr04_ps...    69   6e-13
IMGA|Medtr3g144480.1 Protein of unknown function DUF502 chr03_ps...    61   1e-10

>IMGA|Medtr4g158980.3 Protein of unknown function DUF502
           chr04_pseudomolecule_IMGAG_V3 40032813-40027142 E
           EGN_Mt090430 20090702
          Length = 129

 Score = 71.6 bits (174), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 39/51 (76%)

Query: 1   YVPTNHLYVGDIFLLNTNDIMRPNLSVRXXXXXXXXXXMSVPQIMTTLDAQ 51
           YVPTNHLY+GDIFL+NT D++RPNLSVR          MS+PQI++TLD+ 
Sbjct: 68  YVPTNHLYIGDIFLVNTKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDSH 118


>IMGA|Medtr4g158980.2 Protein of unknown function DUF502
           chr04_pseudomolecule_IMGAG_V3 40032844-40027142 E
           EGN_Mt090430 20090702
          Length = 202

 Score = 70.1 bits (170), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/51 (60%), Positives = 39/51 (76%)

Query: 1   YVPTNHLYVGDIFLLNTNDIMRPNLSVRXXXXXXXXXXMSVPQIMTTLDAQ 51
           YVPTNHLY+GDIFL+NT D++RPNLSVR          MS+PQI++TLD+ 
Sbjct: 141 YVPTNHLYIGDIFLVNTKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDSH 191


>IMGA|Medtr4g159280.1 Protein of unknown function DUF502
           chr04_pseudomolecule_IMGAG_V3 40142075-40136404 E
           EGN_Mt090430 20090702
          Length = 270

 Score = 70.1 bits (170), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/51 (60%), Positives = 39/51 (76%)

Query: 1   YVPTNHLYVGDIFLLNTNDIMRPNLSVRXXXXXXXXXXMSVPQIMTTLDAQ 51
           YVPTNHLY+GDIFL+NT D++RPNLSVR          MS+PQI++TLD+ 
Sbjct: 209 YVPTNHLYIGDIFLVNTKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDSH 259


>IMGA|Medtr4g158980.1 Protein of unknown function DUF502
           chr04_pseudomolecule_IMGAG_V3 40032813-40027142 E
           EGN_Mt090430 20090702
          Length = 270

 Score = 70.1 bits (170), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/51 (60%), Positives = 39/51 (76%)

Query: 1   YVPTNHLYVGDIFLLNTNDIMRPNLSVRXXXXXXXXXXMSVPQIMTTLDAQ 51
           YVPTNHLY+GDIFL+NT D++RPNLSVR          MS+PQI++TLD+ 
Sbjct: 209 YVPTNHLYIGDIFLVNTKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDSH 259


>IMGA|Medtr4g159250.1 Protein of unknown function DUF502
           chr04_pseudomolecule_IMGAG_V3 40130661-40127717 E
           EGN_Mt090430 20090702
          Length = 129

 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 42/55 (76%), Gaps = 1/55 (1%)

Query: 1   YVPTNHLYVGDIFLLNTNDIMRPNLSVRXXXXXXXXXXMSVPQIMTTLDAQAIPA 55
           YVPTNHLY+GDIFL+NT D++RP LSVR          MS+PQI++TL+++ +PA
Sbjct: 68  YVPTNHLYIGDIFLVNTKDVIRPTLSVREGIEIVVSGGMSMPQILSTLESR-VPA 121


>IMGA|Medtr4g158960.1 Protein of unknown function DUF502
           chr04_pseudomolecule_IMGAG_V3 40024218-40018123 E
           EGN_Mt090430 20090702
          Length = 265

 Score = 68.9 bits (167), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 42/55 (76%), Gaps = 1/55 (1%)

Query: 1   YVPTNHLYVGDIFLLNTNDIMRPNLSVRXXXXXXXXXXMSVPQIMTTLDAQAIPA 55
           YVPTNHLY+GDIFL+NT D++RP LSVR          MS+PQI++TL+++ +PA
Sbjct: 204 YVPTNHLYIGDIFLVNTKDVIRPTLSVREGIEIVVSGGMSMPQILSTLESR-VPA 257


>IMGA|Medtr3g144480.1 Protein of unknown function DUF502
           chr03_pseudomolecule_IMGAG_V3 37458260-37451390 E
           EGN_Mt090430 20090702
          Length = 258

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 41/59 (69%)

Query: 1   YVPTNHLYVGDIFLLNTNDIMRPNLSVRXXXXXXXXXXMSVPQIMTTLDAQAIPATRLS 59
           ++PTNHLY+GDI L+N+ D++RPNLS+R          M++PQ+++ ++  A P  R+S
Sbjct: 195 FIPTNHLYIGDIILINSKDVIRPNLSIREGIEIIVSGGMTMPQVISPIERVAHPNERIS 253