Jatropha Genome Database

JcCB0189041.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0189041.20 - phase: 2 /partial
         (196 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g140980.1 Light-inducible protein CPRF-2, related chr...   198   2e-51
IMGA|Medtr1g010030.1 bZIP transcription factor, bZIP_1 chr01_pse...    87   6e-18
IMGA|Medtr1g010030.3 bZIP transcription factor, bZIP_1 chr01_pse...    87   8e-18
IMGA|Medtr3g132860.1 bZIP transcription factor, bZIP_1 chr03_pse...    82   2e-16
IMGA|Medtr3g132860.2 bZIP transcription factor, bZIP_1 chr03_pse...    82   2e-16
IMGA|AC225518_34.1 Cyclin-like F-box; FBD; bZIP transcription fa...    67   4e-12

>IMGA|Medtr7g140980.1 Light-inducible protein CPRF-2, related
           chr07_pseudomolecule_IMGAG_V3 34043703-34046960 E
           EGN_Mt090430 20090702
          Length = 389

 Score =  198 bits (503), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 108/175 (61%), Positives = 137/175 (78%), Gaps = 10/175 (5%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQAHLTELETQV++LR ENSSLLKRL+D++ K+N+++VDNR+LKADVETLRAKVKMAEET
Sbjct: 214 KQAHLTELETQVSELRGENSSLLKRLTDVTQKFNNSAVDNRILKADVETLRAKVKMAEET 273

Query: 75  VKRITGLNPLSHSMPEISTISMPSFDGSPSDTLTDAAVPIQDEP-KRLYQ-LPNNPLSTR 132
           VKR TG NP+ ++M E+S++ M  FDGSPS++  DA+VP+Q++P    +Q LPN+ +S+ 
Sbjct: 274 VKRFTGSNPVFNAMSEVSSMGMSLFDGSPSESSADASVPVQEDPNNHFFQPLPNHLMSSH 333

Query: 133 DPRVNNGLTN--ISSAENIQ-PPSGTAGLAGNKIGRTASLQRVASLEHLQKRICG 184
           D R  N  +   ISSAE+ Q  P+G     GNKIGRT SL RVASLEHLQ RI G
Sbjct: 334 DMRGANNRSGSIISSAESGQNTPAG-----GNKIGRTNSLPRVASLEHLQSRIRG 383


>IMGA|Medtr1g010030.1 bZIP transcription factor, bZIP_1
           chr01_pseudomolecule_IMGAG_V3 1556651-1551200 F
           EGN_Mt090430 20090702
          Length = 339

 Score = 86.7 bits (213), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 53/65 (81%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQAHL +LE QV QLR+EN+SL K+L+D S ++ DA+ +NRVLK+DVE LRAKVK+AE+ 
Sbjct: 190 KQAHLADLEVQVEQLRLENASLFKQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEDM 249

Query: 75  VKRIT 79
           V R T
Sbjct: 250 VSRGT 254


>IMGA|Medtr1g010030.3 bZIP transcription factor, bZIP_1
          chr01_pseudomolecule_IMGAG_V3 1553273-1551200 F
          EGN_Mt090430 20090702
          Length = 170

 Score = 86.7 bits (213), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 53/65 (81%)

Query: 15 KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
          KQAHL +LE QV QLR+EN+SL K+L+D S ++ DA+ +NRVLK+DVE LRAKVK+AE+ 
Sbjct: 21 KQAHLADLEVQVEQLRLENASLFKQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEDM 80

Query: 75 VKRIT 79
          V R T
Sbjct: 81 VSRGT 85


>IMGA|Medtr3g132860.1 bZIP transcription factor, bZIP_1
           chr03_pseudomolecule_IMGAG_V3 33515592-33511336 E
           EGN_Mt090430 20090702
          Length = 299

 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 61/83 (73%), Gaps = 4/83 (4%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQAHL+ELE QV +L++EN++L K+ +D S ++++A  +NRVLK+DVE LRAKVK+AE+ 
Sbjct: 149 KQAHLSELEAQVEKLKLENATLYKQFTDTSQQFHEADTNNRVLKSDVEALRAKVKLAEDM 208

Query: 75  VKR---ITGL-NPLSHSMPEIST 93
           V R    T L N   H+  ++ST
Sbjct: 209 VTRSSFTTSLNNQFLHNQCQMST 231


>IMGA|Medtr3g132860.2 bZIP transcription factor, bZIP_1
           chr03_pseudomolecule_IMGAG_V3 33515592-33511336 E
           EGN_Mt090430 20090702
          Length = 171

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 61/83 (73%), Gaps = 4/83 (4%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQAHL+ELE QV +L++EN++L K+ +D S ++++A  +NRVLK+DVE LRAKVK+AE+ 
Sbjct: 21  KQAHLSELEAQVEKLKLENATLYKQFTDTSQQFHEADTNNRVLKSDVEALRAKVKLAEDM 80

Query: 75  VKR---ITGL-NPLSHSMPEIST 93
           V R    T L N   H+  ++ST
Sbjct: 81  VTRSSFTTSLNNQFLHNQCQMST 103


>IMGA|AC225518_34.1 Cyclin-like F-box; FBD; bZIP transcription
           factor, bZIP_1; AC225518.12 127339-131217 E EGN_Mt090430
           20090702
          Length = 787

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 56/80 (70%), Gaps = 3/80 (3%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQAHL ELE+QV +L++EN++L K+ +D S ++++A  +N+VLK+DVE LRAK  +   +
Sbjct: 682 KQAHLFELESQVGKLKLENATLYKQFTDASQQFHEADTNNQVLKSDVEALRAKHIVTRSS 741

Query: 75  VKRITGL-NPLSHSMPEIST 93
              IT L N   H+  ++ST
Sbjct: 742 F--ITSLNNQFLHNQCQMST 759