Jatropha Genome Database

JcCB0186801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0186801.10 + phase: 2 /pseudo/partial
         (348 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g098770.1 Protein of unknown function DUF1675 chr06_p...   291   4e-79
IMGA|Medtr6g098750.1 Protein of unknown function DUF1675 chr06_p...   291   4e-79
IMGA|Medtr6g098770.2 Protein of unknown function DUF1675 chr06_p...   291   5e-79

>IMGA|Medtr6g098770.1 Protein of unknown function DUF1675
           chr06_pseudomolecule_IMGAG_V3 21475186-21471561 F
           EGN_Mt090430 20090702
          Length = 487

 Score =  291 bits (745), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 164/292 (56%), Positives = 208/292 (71%), Gaps = 15/292 (5%)

Query: 48  KNLLHASSQKQDSSLGSQISDSVKPQENFFNDLSKANIDADASVNLKNRGLWV-SGSNRP 106
           K++ +   QK +SS GS+ +DS KP+ENFF+DLSK N D +AS+NL  RG  V + +N+P
Sbjct: 48  KSMFNTDPQKPESSGGSRRADSSKPEENFFSDLSKVN-DDNASLNLNGRGFLVGNNNNKP 106

Query: 107 AEIEEEKRPEAGNKRKMLFDDINNQKKQERDAHHSDVHDK-KASHISITTEDGSTAENED 165
            EIEE KR EA NKR+M FDDI N K+ + D HH D+HD+ +ASHIS+T EDGSTAENED
Sbjct: 107 IEIEENKRSEAVNKRRMSFDDIRNLKRHDSDIHHGDLHDRARASHISLT-EDGSTAENED 165

Query: 166 VAESEVEGSTSRLLSHHDVGSKRFIGVGAPSEVPKEVRGFSDSGVIDLQGQKRPNGSSET 225
           VA+SE E STSR LS+H  GSK FI VGA S+  KEVRG +DS      GQKR  GS+E 
Sbjct: 166 VADSEAENSTSRPLSNHSDGSKGFIRVGASSDASKEVRGVADSSA---NGQKRFTGSTEK 222

Query: 226 EIKHGNLNYGVPFSVRPVNIMNFPYSFPIKESNCIGIPNTSGPPLSGMMQVVPTSNGEHQ 285
           + KH N+ YG PFS + VN+M+ PY+   KESN +G PN   P + G+M ++PT+ GE +
Sbjct: 223 DFKHANMTYGAPFSAQQVNMMSGPYT-SAKESNSVGAPN---PQIPGVMHMMPTTTGE-R 277

Query: 286 TGTQSASPGNLPVTFGYSPVQLPTLDKDNSWSLVSHLQQFHPSYAGRGPSNS 337
            G QS S G+LP+ FG+  VQLP LDKD+SW      QQFHPS+AGRGP+NS
Sbjct: 278 AGAQSVSNGSLPMMFGHPYVQLPMLDKDSSW---GRPQQFHPSFAGRGPANS 326


>IMGA|Medtr6g098750.1 Protein of unknown function DUF1675
           chr06_pseudomolecule_IMGAG_V3 21454153-21457778 E
           EGN_Mt090430 20090702
          Length = 487

 Score =  291 bits (745), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 164/292 (56%), Positives = 208/292 (71%), Gaps = 15/292 (5%)

Query: 48  KNLLHASSQKQDSSLGSQISDSVKPQENFFNDLSKANIDADASVNLKNRGLWV-SGSNRP 106
           K++ +   QK +SS GS+ +DS KP+ENFF+DLSK N D +AS+NL  RG  V + +N+P
Sbjct: 48  KSMFNTDPQKPESSGGSRRADSSKPEENFFSDLSKVN-DDNASLNLNGRGFLVGNNNNKP 106

Query: 107 AEIEEEKRPEAGNKRKMLFDDINNQKKQERDAHHSDVHDK-KASHISITTEDGSTAENED 165
            EIEE KR EA NKR+M FDDI N K+ + D HH D+HD+ +ASHIS+T EDGSTAENED
Sbjct: 107 IEIEENKRSEAVNKRRMSFDDIRNLKRHDSDIHHGDLHDRARASHISLT-EDGSTAENED 165

Query: 166 VAESEVEGSTSRLLSHHDVGSKRFIGVGAPSEVPKEVRGFSDSGVIDLQGQKRPNGSSET 225
           VA+SE E STSR LS+H  GSK FI VGA S+  KEVRG +DS      GQKR  GS+E 
Sbjct: 166 VADSEAENSTSRPLSNHSDGSKGFIRVGASSDASKEVRGVADSSA---NGQKRFTGSTEK 222

Query: 226 EIKHGNLNYGVPFSVRPVNIMNFPYSFPIKESNCIGIPNTSGPPLSGMMQVVPTSNGEHQ 285
           + KH N+ YG PFS + VN+M+ PY+   KESN +G PN   P + G+M ++PT+ GE +
Sbjct: 223 DFKHANMTYGAPFSAQQVNMMSGPYT-SAKESNSVGAPN---PQIPGVMHMMPTTTGE-R 277

Query: 286 TGTQSASPGNLPVTFGYSPVQLPTLDKDNSWSLVSHLQQFHPSYAGRGPSNS 337
            G QS S G+LP+ FG+  VQLP LDKD+SW      QQFHPS+AGRGP+NS
Sbjct: 278 AGAQSVSNGSLPMMFGHPYVQLPMLDKDSSW---GRPQQFHPSFAGRGPANS 326


>IMGA|Medtr6g098770.2 Protein of unknown function DUF1675
           chr06_pseudomolecule_IMGAG_V3 21475186-21471561 F
           EGN_Mt090430 20090702
          Length = 445

 Score =  291 bits (744), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 164/292 (56%), Positives = 208/292 (71%), Gaps = 15/292 (5%)

Query: 48  KNLLHASSQKQDSSLGSQISDSVKPQENFFNDLSKANIDADASVNLKNRGLWV-SGSNRP 106
           K++ +   QK +SS GS+ +DS KP+ENFF+DLSK N D +AS+NL  RG  V + +N+P
Sbjct: 6   KSMFNTDPQKPESSGGSRRADSSKPEENFFSDLSKVN-DDNASLNLNGRGFLVGNNNNKP 64

Query: 107 AEIEEEKRPEAGNKRKMLFDDINNQKKQERDAHHSDVHDK-KASHISITTEDGSTAENED 165
            EIEE KR EA NKR+M FDDI N K+ + D HH D+HD+ +ASHIS+T EDGSTAENED
Sbjct: 65  IEIEENKRSEAVNKRRMSFDDIRNLKRHDSDIHHGDLHDRARASHISLT-EDGSTAENED 123

Query: 166 VAESEVEGSTSRLLSHHDVGSKRFIGVGAPSEVPKEVRGFSDSGVIDLQGQKRPNGSSET 225
           VA+SE E STSR LS+H  GSK FI VGA S+  KEVRG +DS      GQKR  GS+E 
Sbjct: 124 VADSEAENSTSRPLSNHSDGSKGFIRVGASSDASKEVRGVADSSA---NGQKRFTGSTEK 180

Query: 226 EIKHGNLNYGVPFSVRPVNIMNFPYSFPIKESNCIGIPNTSGPPLSGMMQVVPTSNGEHQ 285
           + KH N+ YG PFS + VN+M+ PY+   KESN +G PN   P + G+M ++PT+ GE +
Sbjct: 181 DFKHANMTYGAPFSAQQVNMMSGPYT-SAKESNSVGAPN---PQIPGVMHMMPTTTGE-R 235

Query: 286 TGTQSASPGNLPVTFGYSPVQLPTLDKDNSWSLVSHLQQFHPSYAGRGPSNS 337
            G QS S G+LP+ FG+  VQLP LDKD+SW      QQFHPS+AGRGP+NS
Sbjct: 236 AGAQSVSNGSLPMMFGHPYVQLPMLDKDSSW---GRPQQFHPSFAGRGPANS 284