Jatropha Genome Database

JcCB0186601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0186601.10 - phase: 0 
         (63 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g021880.1 Protein of unknown function DUF827, plant c...    69   8e-13
IMGA|Medtr3g156320.1 Protein of unknown function DUF827, plant c...    64   1e-11

>IMGA|Medtr5g021880.1 Protein of unknown function DUF827, plant
          chr05_pseudomolecule_IMGAG_V3 8447717-8446580 E
          EGN_Mt090430 20090702
          Length = 215

 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 34/49 (69%), Positives = 41/49 (83%), Gaps = 1/49 (2%)

Query: 1  MDTEE-GVVVIKRAEIDTRPPFRSVKEAVTLFGEKVLAGELYANKLKEV 48
          MD EE G +++ RAEIDT  PF+SVKEAV LFGE+VL GE+YANKLKE+
Sbjct: 1  MDREESGTLIMGRAEIDTGAPFKSVKEAVLLFGERVLVGEIYANKLKEM 49


>IMGA|Medtr3g156320.1 Protein of unknown function DUF827, plant
          chr03_pseudomolecule_IMGAG_V3 40973953-40972248 E
          EGN_Mt090430 20090702
          Length = 214

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 39/48 (81%), Gaps = 3/48 (6%)

Query: 5  EGVVVIKR-AEIDTRPPFRSVKEAVTLFGEKVLAGELY--ANKLKEVI 49
          EGV+++ R  EIDTR PFRSVKEAVTLFG+KVLAGELY  A KLK  I
Sbjct: 6  EGVMLLTRNTEIDTRAPFRSVKEAVTLFGDKVLAGELYATATKLKHQI 53