Jatropha Genome Database

JcCB0186451.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0186451.10 - phase: 0 
         (301 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g076920.1 Conserved hypothetical protein 730 chr03_ps...   390   e-109
IMGA|Medtr3g076920.2 Conserved hypothetical protein 730 chr03_ps...   308   2e-84
IMGA|Medtr3g076920.4 Conserved hypothetical protein 730 chr03_ps...   279   1e-75
IMGA|Medtr3g076920.3 Conserved hypothetical protein 730 chr03_ps...    87   1e-17

>IMGA|Medtr3g076920.1 Conserved hypothetical protein 730
           chr03_pseudomolecule_IMGAG_V3 17963885-17967657 E
           EGN_Mt090430 20090702
          Length = 312

 Score =  390 bits (1001), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 186/261 (71%), Positives = 212/261 (81%), Gaps = 2/261 (0%)

Query: 42  SNFKPSTRRISLCKNKL--VDFDERTSPNEVRREIERCYNLIQRLGRGVVYLGSSRMGPD 99
           S  K + R I + K+K    +FDER SPNEV+ EI++CY LI RLGRG+VYLGSSRMG  
Sbjct: 47  SKHKANHRSIFVSKSKQESFEFDERKSPNEVKEEIKQCYELINRLGRGIVYLGSSRMGSS 106

Query: 100 HPHYLQVLELGREVAKLLDCTSWTGAGPGLMDAAIKGALEAGKPVGGFKIAKEAGEWTAS 159
           H HY+Q  EL +E   LLD T+W+GAGPGLMDA  +GAL AGKPVGGFKI +EAGEWTAS
Sbjct: 107 HSHYVQAQELAKEATNLLDSTTWSGAGPGLMDAVTQGALLAGKPVGGFKIGREAGEWTAS 166

Query: 160 NFHAYLPSETYLTCRFFSARKHGLVDAAVRNNSSDKTAVVALPGGIGTLDEMFEILALIQ 219
           NFH YLPSE YLTCRFFSARKHGLVDA VRNNS DKTAVVALPGGIGTLDE+FE+LALIQ
Sbjct: 167 NFHPYLPSENYLTCRFFSARKHGLVDAVVRNNSFDKTAVVALPGGIGTLDELFEMLALIQ 226

Query: 220 LERIGSELPVPFIVMNYDSFYQKLLDFIQNCEDWGTVSRGEVASLWKVCNNNSDALAYLT 279
           LERIGS+LPVPF++MNYDSFY KLLDF+  CED GTVS+GEVASLWKVCN+NS+ALAYL 
Sbjct: 227 LERIGSKLPVPFLLMNYDSFYSKLLDFLDVCEDRGTVSKGEVASLWKVCNSNSEALAYLA 286

Query: 280 DFYNIHSSSDEDRHDKKLTTA 300
           DFY I S     + + KL + 
Sbjct: 287 DFYCISSGDISQKKETKLQST 307


>IMGA|Medtr3g076920.2 Conserved hypothetical protein 730
           chr03_pseudomolecule_IMGAG_V3 17963885-17967657 E
           EGN_Mt090430 20090702
          Length = 204

 Score =  308 bits (790), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 146/189 (77%), Positives = 164/189 (86%)

Query: 111 REVAKLLDCTSWTGAGPGLMDAAIKGALEAGKPVGGFKIAKEAGEWTASNFHAYLPSETY 170
           R++A LLD T+W+GAGPGLMDA  +GAL AGKPVGGFKI +EAGEWTASNFH YLPSE Y
Sbjct: 10  RQIANLLDSTTWSGAGPGLMDAVTQGALLAGKPVGGFKIGREAGEWTASNFHPYLPSENY 69

Query: 171 LTCRFFSARKHGLVDAAVRNNSSDKTAVVALPGGIGTLDEMFEILALIQLERIGSELPVP 230
           LTCRFFSARKHGLVDA VRNNS DKTAVVALPGGIGTLDE+FE+LALIQLERIGS+LPVP
Sbjct: 70  LTCRFFSARKHGLVDAVVRNNSFDKTAVVALPGGIGTLDELFEMLALIQLERIGSKLPVP 129

Query: 231 FIVMNYDSFYQKLLDFIQNCEDWGTVSRGEVASLWKVCNNNSDALAYLTDFYNIHSSSDE 290
           F++MNYDSFY KLLDF+  CED GTVS+GEVASLWKVCN+NS+ALAYL DFY I S    
Sbjct: 130 FLLMNYDSFYSKLLDFLDVCEDRGTVSKGEVASLWKVCNSNSEALAYLADFYCISSGDIS 189

Query: 291 DRHDKKLTT 299
            + + KL +
Sbjct: 190 QKKETKLQS 198


>IMGA|Medtr3g076920.4 Conserved hypothetical protein 730
           chr03_pseudomolecule_IMGAG_V3 17963885-17967657 E
           EGN_Mt090430 20090702
          Length = 176

 Score =  279 bits (714), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 133/170 (78%), Positives = 147/170 (86%)

Query: 130 MDAAIKGALEAGKPVGGFKIAKEAGEWTASNFHAYLPSETYLTCRFFSARKHGLVDAAVR 189
           MDA  +GAL AGKPVGGFKI +EAGEWTASNFH YLPSE YLTCRFFSARKHGLVDA VR
Sbjct: 1   MDAVTQGALLAGKPVGGFKIGREAGEWTASNFHPYLPSENYLTCRFFSARKHGLVDAVVR 60

Query: 190 NNSSDKTAVVALPGGIGTLDEMFEILALIQLERIGSELPVPFIVMNYDSFYQKLLDFIQN 249
           NNS DKTAVVALPGGIGTLDE+FE+LALIQLERIGS+LPVPF++MNYDSFY KLLDF+  
Sbjct: 61  NNSFDKTAVVALPGGIGTLDELFEMLALIQLERIGSKLPVPFLLMNYDSFYSKLLDFLDV 120

Query: 250 CEDWGTVSRGEVASLWKVCNNNSDALAYLTDFYNIHSSSDEDRHDKKLTT 299
           CED GTVS+GEVASLWKVCN+NS+ALAYL DFY I S     + + KL +
Sbjct: 121 CEDRGTVSKGEVASLWKVCNSNSEALAYLADFYCISSGDISQKKETKLQS 170


>IMGA|Medtr3g076920.3 Conserved hypothetical protein 730
           chr03_pseudomolecule_IMGAG_V3 17963885-17966591 E
           EGN_Mt090430 20090702
          Length = 194

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 47/63 (74%)

Query: 51  ISLCKNKLVDFDERTSPNEVRREIERCYNLIQRLGRGVVYLGSSRMGPDHPHYLQVLELG 110
           +S  K +  +FDER SPNEV+ EI++CY LI RLGRG+VYLGSSRMG  H HY+Q  EL 
Sbjct: 58  VSKSKQESFEFDERKSPNEVKEEIKQCYELINRLGRGIVYLGSSRMGSSHSHYVQAQELA 117

Query: 111 REV 113
           +E 
Sbjct: 118 KEA 120