Jatropha Genome Database

JcCB0184671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0184671.10 + phase: 0 
         (52 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g111560.2 Mitochondrial import inner membrane translo...    52   9e-08
IMGA|Medtr7g111560.1 Mitochondrial import inner membrane translo...    52   9e-08

>IMGA|Medtr7g111560.2 Mitochondrial import inner membrane
          translocase, subunit Tim17/22
          chr07_pseudomolecule_IMGAG_V3 26249524-26242934 E
          EGN_Mt090430 20090702
          Length = 99

 Score = 51.6 bits (122), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/43 (67%), Positives = 31/43 (72%)

Query: 5  RSISTAISAGAALAVTSAVIDAGGQTTRIDNGKEYYPYTTKKR 47
          RSISTAISAG+ALA TSAVID      + D GKEY   TTKKR
Sbjct: 52 RSISTAISAGSALAFTSAVIDFAATPFKHDEGKEYAALTTKKR 94


>IMGA|Medtr7g111560.1 Mitochondrial import inner membrane
           translocase, subunit Tim17/22
           chr07_pseudomolecule_IMGAG_V3 26249524-26242934 E
           EGN_Mt090430 20090702
          Length = 159

 Score = 51.6 bits (122), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/43 (67%), Positives = 31/43 (72%)

Query: 5   RSISTAISAGAALAVTSAVIDAGGQTTRIDNGKEYYPYTTKKR 47
           RSISTAISAG+ALA TSAVID      + D GKEY   TTKKR
Sbjct: 112 RSISTAISAGSALAFTSAVIDFAATPFKHDEGKEYAALTTKKR 154