Jatropha Genome Database

JcCB0183721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0183721.10 - phase: 2 /partial
         (310 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g092800.1 Peptidase C54 chr07_pseudomolecule_IMGAG_V3...   427   e-120

>IMGA|Medtr7g092800.1 Peptidase C54 chr07_pseudomolecule_IMGAG_V3
           20520504-20516975 E EGN_Mt090430 20090702
          Length = 487

 Score =  427 bits (1097), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/331 (64%), Positives = 252/331 (76%), Gaps = 23/331 (6%)

Query: 1   LWSSFFTAAFSVFETYRESPPTTSEKKGSHTRNNGWTSAVKKIVAGGSMRRIHERVLGPS 60
           LWS+FFT+ FSV ETY ES  ++SEKK  H+RN+GW +AV+K+V+GGSMRR  ERVLG  
Sbjct: 47  LWSTFFTSGFSVDETYSES--SSSEKKTVHSRNSGWAAAVRKVVSGGSMRRFQERVLGSC 104

Query: 61  RTGISNTTSEIWLLGVCYKISQDGSNADAAT---------------------SFDAIGDS 99
           RT +S++  +IWLLGVC+KISQ  S  D                         FDAI DS
Sbjct: 105 RTDVSSSDGDIWLLGVCHKISQHESTGDVDIRNVFAAFEQDFFSRILITYRKGFDAIEDS 164

Query: 100 KFTSDVGWGCMLRSSQMLVAQALLFHQLGRSWRKPIQKPLDQKYVEILHLFGDSEASPFS 159
           K+TSDV WGCMLRSSQMLVAQALLFH+LGRSWRK + KP+D++Y++IL LFGDSEA+ FS
Sbjct: 165 KYTSDVNWGCMLRSSQMLVAQALLFHKLGRSWRKTVDKPVDKEYIDILQLFGDSEAAAFS 224

Query: 160 IHNLIHAGKAYGLAAGSWVGPYAMCRSWELLARCKREENNLEHEALPMAVYVVSGDEDGE 219
           IHNL+ AGK YGLA GSWVGPYAMCR+WE+LAR +RE+N    + LPMA+YVVSGDEDGE
Sbjct: 225 IHNLLQAGKGYGLAVGSWVGPYAMCRTWEVLARNQREKNEQGEQLLPMAIYVVSGDEDGE 284

Query: 220 RGGAPVVCIEDASRHCLDFSRGQANWTPIXXXXXXXXXXEKVNLRYIPSLQATLTFPQSL 279
           RGGAPVVCIEDA + CL+FSRG   WTP+          +KVNLRYIP LQ+T  FPQSL
Sbjct: 285 RGGAPVVCIEDACKRCLEFSRGLVPWTPLLLLVPLVLGLDKVNLRYIPLLQSTFKFPQSL 344

Query: 280 GIMGGKPGASTYIVGVQDDNAFYLDPHGVQP 310
           GI+GGKPGASTYI+GVQ+D AFYLDPH V+P
Sbjct: 345 GILGGKPGASTYIIGVQNDKAFYLDPHEVKP 375