Jatropha Genome Database

JcCB0176661.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0176661.10 + phase: 0 /partial
         (204 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g096930.1 Aspartate kinase region chr07_pseudomolecul...   332   1e-91
IMGA|Medtr4g132760.2 Aminoacyl-tRNA synthetase, class I; Bifunct...    70   6e-13
IMGA|Medtr4g132760.3 Aminoacyl-tRNA synthetase, class I; Bifunct...    70   7e-13
IMGA|Medtr4g132760.1 Aminoacyl-tRNA synthetase, class I; Bifunct...    70   7e-13
IMGA|Medtr3g104620.1 Aspartate kinase region; Aminoacyl-tRNA syn...    67   5e-12

>IMGA|Medtr7g096930.1 Aspartate kinase region
           chr07_pseudomolecule_IMGAG_V3 21815615-21821919 E
           EGN_Mt090430 20090702
          Length = 472

 Score =  332 bits (850), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/205 (82%), Positives = 186/205 (90%), Gaps = 3/205 (1%)

Query: 1   VLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITRARDMRKAVLTSIVLKRNVTMLDIVST 60
           VLHPQSMRPAREGDIPVRVKNSYNP A GTLIT+ RDM KA+LTSIVLKRNVT LDIVST
Sbjct: 256 VLHPQSMRPAREGDIPVRVKNSYNPKASGTLITKTRDMSKALLTSIVLKRNVTTLDIVST 315

Query: 61  RMLGQFGFLAKVFSIFEDLGISVDVVATSEVSISLTLDPSKVWSRELIQQASELDHVVEE 120
           RMLG  GFLAKVFSIFEDLGIS+D+VATSEVSISLTLDPSK+WSRELIQQ  ELD+VVEE
Sbjct: 316 RMLGTVGFLAKVFSIFEDLGISIDMVATSEVSISLTLDPSKLWSRELIQQ--ELDYVVEE 373

Query: 121 LEKIAVVNLLQHRSIISLIGNVQRSSLILEKVFNVLRTNGVNVQMISQGASKVNISLIVN 180
           LEKI+VVNLL++RSIISLIGNVQ SS ILEK F VL + GVNVQMISQGASKVNISL+VN
Sbjct: 374 LEKISVVNLLKNRSIISLIGNVQMSSKILEKAFQVLGSLGVNVQMISQGASKVNISLVVN 433

Query: 181 DDEAEQCVRSLHKTFFETD-ISELD 204
           +DEAEQ VR+LHK FFE+  +SEL+
Sbjct: 434 NDEAEQSVRTLHKIFFESGKLSELE 458


>IMGA|Medtr4g132760.2 Aminoacyl-tRNA synthetase, class I;
           Bifunctional aspartokinase/homoserine dehydrogenase I
           chr04_pseudomolecule_IMGAG_V3 31631381-31644243 E
           EGN_Mt090430 20090702
          Length = 916

 Score = 70.1 bits (170), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 109/216 (50%), Gaps = 32/216 (14%)

Query: 1   VLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITRA-------RDMRKAVLTSIVLKRNVT 53
           VLHP+++ P     IP+ ++N +N +APGT I          +   +  +       N+ 
Sbjct: 349 VLHPRTIIPVMRYGIPILIRNIFNLSAPGTKICHPVVSDYEDKSNLQNYVKGFATIDNLA 408

Query: 54  MLDIVSTRMLGQFGFLAKVFSIFEDLGISVDVV--ATSEVSISLTLDPSKVWSRELIQQA 111
           ++++  T M G  G  + +F+  +D+G +V ++  A+SE S+   + P K          
Sbjct: 409 LVNVEGTGMAGVPGTASAIFAAVKDVGANVIMISQASSEHSVCFAV-PEK---------- 457

Query: 112 SELDHVVEELE----------KIAVVNLLQHRSIISLIGNVQRSSL-ILEKVFNVLRTNG 160
            E+  V E L+          +++ V ++ + SI++ +G    S+  +   +FN L    
Sbjct: 458 -EVKAVAEALQSRFRQALDNGRLSQVAVIPNCSILAAVGQKMASTPGVSATLFNALAKAN 516

Query: 161 VNVQMISQGASKVNISLIVNDDEAEQCVRSLHKTFF 196
           +NV+ I+QG S+ NI++++  +++ + +R++H  F+
Sbjct: 517 INVRAIAQGCSEYNITVVIKREDSIKALRAVHSRFY 552


>IMGA|Medtr4g132760.3 Aminoacyl-tRNA synthetase, class I;
           Bifunctional aspartokinase/homoserine dehydrogenase I
           chr04_pseudomolecule_IMGAG_V3 31631381-31644243 E
           EGN_Mt090430 20090702
          Length = 909

 Score = 70.1 bits (170), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 109/216 (50%), Gaps = 32/216 (14%)

Query: 1   VLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITRA-------RDMRKAVLTSIVLKRNVT 53
           VLHP+++ P     IP+ ++N +N +APGT I          +   +  +       N+ 
Sbjct: 342 VLHPRTIIPVMRYGIPILIRNIFNLSAPGTKICHPVVSDYEDKSNLQNYVKGFATIDNLA 401

Query: 54  MLDIVSTRMLGQFGFLAKVFSIFEDLGISVDVV--ATSEVSISLTLDPSKVWSRELIQQA 111
           ++++  T M G  G  + +F+  +D+G +V ++  A+SE S+   + P K          
Sbjct: 402 LVNVEGTGMAGVPGTASAIFAAVKDVGANVIMISQASSEHSVCFAV-PEK---------- 450

Query: 112 SELDHVVEELE----------KIAVVNLLQHRSIISLIGNVQRSSL-ILEKVFNVLRTNG 160
            E+  V E L+          +++ V ++ + SI++ +G    S+  +   +FN L    
Sbjct: 451 -EVKAVAEALQSRFRQALDNGRLSQVAVIPNCSILAAVGQKMASTPGVSATLFNALAKAN 509

Query: 161 VNVQMISQGASKVNISLIVNDDEAEQCVRSLHKTFF 196
           +NV+ I+QG S+ NI++++  +++ + +R++H  F+
Sbjct: 510 INVRAIAQGCSEYNITVVIKREDSIKALRAVHSRFY 545


>IMGA|Medtr4g132760.1 Aminoacyl-tRNA synthetase, class I;
           Bifunctional aspartokinase/homoserine dehydrogenase I
           chr04_pseudomolecule_IMGAG_V3 31631381-31644243 E
           EGN_Mt090430 20090702
          Length = 917

 Score = 70.1 bits (170), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 109/216 (50%), Gaps = 32/216 (14%)

Query: 1   VLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITRA-------RDMRKAVLTSIVLKRNVT 53
           VLHP+++ P     IP+ ++N +N +APGT I          +   +  +       N+ 
Sbjct: 350 VLHPRTIIPVMRYGIPILIRNIFNLSAPGTKICHPVVSDYEDKSNLQNYVKGFATIDNLA 409

Query: 54  MLDIVSTRMLGQFGFLAKVFSIFEDLGISVDVV--ATSEVSISLTLDPSKVWSRELIQQA 111
           ++++  T M G  G  + +F+  +D+G +V ++  A+SE S+   + P K          
Sbjct: 410 LVNVEGTGMAGVPGTASAIFAAVKDVGANVIMISQASSEHSVCFAV-PEK---------- 458

Query: 112 SELDHVVEELE----------KIAVVNLLQHRSIISLIGNVQRSSL-ILEKVFNVLRTNG 160
            E+  V E L+          +++ V ++ + SI++ +G    S+  +   +FN L    
Sbjct: 459 -EVKAVAEALQSRFRQALDNGRLSQVAVIPNCSILAAVGQKMASTPGVSATLFNALAKAN 517

Query: 161 VNVQMISQGASKVNISLIVNDDEAEQCVRSLHKTFF 196
           +NV+ I+QG S+ NI++++  +++ + +R++H  F+
Sbjct: 518 INVRAIAQGCSEYNITVVIKREDSIKALRAVHSRFY 553


>IMGA|Medtr3g104620.1 Aspartate kinase region; Aminoacyl-tRNA
           synthetase, class I chr03_pseudomolecule_IMGAG_V3
           26062388-26055010 E EGN_Mt090430 20090702
          Length = 906

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 109/218 (50%), Gaps = 32/218 (14%)

Query: 1   VLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITRA-------RDMRKAVLTSIVLKRNVT 53
           VLHP+++ P     IP+ ++N +N +A GT I          + + K  +       N+ 
Sbjct: 339 VLHPRTISPVIRYGIPIIIRNIFNTSASGTKICHPSIIENEDKKILKDYVKGFTTIDNLA 398

Query: 54  MLDIVSTRMLGQFGFLAKVFSIFEDLGISVDVV--ATSEVSISLTLDPSKVWSRELIQQA 111
           ++++  T M G  G  + +FS  +++G +V ++  A+SE S+   + P K          
Sbjct: 399 LVNVEGTGMAGVPGTASTIFSAVKEVGANVIMISQASSEHSVCFAV-PEK---------- 447

Query: 112 SELDHVVEELE----------KIAVVNLLQHRSIISLIGNVQRSSL-ILEKVFNVLRTNG 160
            E+  V E LE          +I+ V ++ + SI++ +G    S+  +   +FN L    
Sbjct: 448 -EVKAVAEVLESIFDSALFAGRISQVAVISNCSILAAVGQKMASTPGVSATLFNALAQAN 506

Query: 161 VNVQMISQGASKVNISLIVNDDEAEQCVRSLHKTFFET 198
           +N+  I+QG S+ N+++++  +++ + +R++H  F+ +
Sbjct: 507 INILAIAQGCSEYNVTVVLKREDSIKALRAVHSRFYNS 544