Jatropha Genome Database

JcCB0175111.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0175111.20 - phase: 0 /partial
         (110 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC233682_8.1 Thiosulfate sulfurtransferase AC233682.2 24214...   199   3e-52

>IMGA|AC233682_8.1 Thiosulfate sulfurtransferase AC233682.2
           24214-17031 E EGN_Mt090430 20090702
          Length = 322

 Score =  199 bits (506), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 93/110 (84%), Positives = 99/110 (90%)

Query: 1   MDVFSSCRFDGAAPEPRKGIKSGHIPGSKCIPFPQMLDASQTLLPADELKKRFDQEGISL 60
           +D     RFDG APEPRKGI+SGH+PGSKCIPF QMLD SQTLLPAD+LKKRFDQEGISL
Sbjct: 209 VDARGKPRFDGIAPEPRKGIRSGHVPGSKCIPFSQMLDGSQTLLPADDLKKRFDQEGISL 268

Query: 61  ESSIVTSCGTGVTACILALGLHRLGKQDVAVYDGSWTEWGAHPDTPVDTS 110
           ES +VTSCGTGVTACILALGLHRLGK DV VYDGSWTEWGAHPDTPVDT+
Sbjct: 269 ESPVVTSCGTGVTACILALGLHRLGKTDVPVYDGSWTEWGAHPDTPVDTA 318