Jatropha Genome Database

JcCB0174101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0174101.10 - phase: 0 
         (131 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g137240.1 Mg2+ transporter protein, CorA-like chr04_p...    87   2e-18
IMGA|Medtr5g085990.1 hypothetical protein chr05_pseudomolecule_I...    67   2e-12
IMGA|AC233655_15.1 Mg2+ transporter protein, CorA-like AC233655....    62   1e-10
IMGA|Medtr5g048220.1 Mg2+ transporter protein, CorA-like chr05_p...    58   2e-09
IMGA|Medtr1g117730.1 Mg2+ transporter protein, CorA-like chr01_p...    55   9e-09
IMGA|Medtr5g005440.1 Mg2+ transporter protein, CorA-like chr05_p...    54   2e-08
IMGA|AC233668_24.1 Mg2+ transporter protein, CorA-like AC233668....    52   7e-08
IMGA|AC233668_22.1 Mg2+ transporter protein, CorA-like AC233668....    49   5e-07
IMGA|Medtr4g152120.1 Mg2+ transporter protein, CorA-like chr04_p...    47   2e-06

>IMGA|Medtr4g137240.1 Mg2+ transporter protein, CorA-like
           chr04_pseudomolecule_IMGAG_V3 33771382-33768005 F
           EGN_Mt090430 20090702
          Length = 422

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/50 (76%), Positives = 45/50 (90%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           RLWMRFD+FG SEL+E +K+TII+  AIPARDLRILGPVFSHSSNIL ++
Sbjct: 57  RLWMRFDRFGKSELVEWEKNTIIRHAAIPARDLRILGPVFSHSSNILARE 106


>IMGA|Medtr5g085990.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 32930974-32930674 E
           EGN_Mt090430 20090702
          Length = 55

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 37/44 (84%)

Query: 78  MRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNIL 121
           MRFD+FG  EL+E +K+TII   AIPARDL+ILG VFSHSSNIL
Sbjct: 1   MRFDRFGKYELVEWEKNTIICHAAIPARDLKILGHVFSHSSNIL 44


>IMGA|AC233655_15.1 Mg2+ transporter protein, CorA-like AC233655.2
           106201-110644 E EGN_Mt090430 20090702
          Length = 372

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 37/48 (77%)

Query: 77  WMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           W+R D  GNS+++E DK T+++R  +PARDLR+L PVF + S ILG++
Sbjct: 52  WIRVDTSGNSQVIEVDKFTMMRRCDLPARDLRLLDPVFVYPSTILGRE 99


>IMGA|Medtr5g048220.1 Mg2+ transporter protein, CorA-like
           chr05_pseudomolecule_IMGAG_V3 20373106-20375614 E
           EGN_Mt090430 20090702
          Length = 405

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 39/50 (78%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W++ D+ GNSE++  DK+TI++  ++P+RDLR+L P F + S+ILG++
Sbjct: 39  RSWIKIDQDGNSEIVTLDKATIMRHCSLPSRDLRLLDPKFIYPSSILGRE 88


>IMGA|Medtr1g117730.1 Mg2+ transporter protein, CorA-like
           chr01_pseudomolecule_IMGAG_V3 25349113-25354587 F
           EGN_Mt090430 20090702
          Length = 390

 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 33/50 (66%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W+ FD  G   L++ DK  I+ RV I ARDLRIL P+ S+ S ILG++
Sbjct: 24  RSWIAFDGTGQGSLLDVDKYAIMHRVQINARDLRILDPLLSYPSTILGRE 73


>IMGA|Medtr5g005440.1 Mg2+ transporter protein, CorA-like
           chr05_pseudomolecule_IMGAG_V3 172262-167373 E
           EGN_Mt090430 20090702
          Length = 444

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 34/50 (68%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W+  D  G ++++E  K  I++R  +PARDLRIL P+ S+ S +LG++
Sbjct: 34  RQWLVVDGTGEAQVIEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRE 83


>IMGA|AC233668_24.1 Mg2+ transporter protein, CorA-like AC233668.2
           94552-95150 H EGN_Mt090430 20090702
          Length = 135

 Score = 52.0 bits (123), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 34/55 (61%)

Query: 77  WMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKDHLFGFQF 131
           W++FD  G+S L++ DK  I+ +V I ARDLRI+ P+ S+ S IL +       F
Sbjct: 20  WIKFDANGHSSLLDVDKFEIMHQVRIQARDLRIIDPLLSYPSTILSRKEFIVLNF 74


>IMGA|AC233668_22.1 Mg2+ transporter protein, CorA-like AC233668.2
           88021-91894 H EGN_Mt090430 20090702
          Length = 370

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 34/51 (66%)

Query: 77  WMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKDHLF 127
           W++ D  G+S  ++ DK  ++++V I ARDLRIL P+ S+ S I G++ + 
Sbjct: 16  WIKLDANGHSSFLDIDKYELMRQVRIDARDLRILDPLLSYPSAIFGREDVI 66


>IMGA|Medtr4g152120.1 Mg2+ transporter protein, CorA-like
           chr04_pseudomolecule_IMGAG_V3 37615636-37617136 H
           EGN_Mt090430 20090702
          Length = 250

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 31/48 (64%)

Query: 77  WMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           WM   + G S + + DK +I++R  +P RDLR L P  S+ S+ILG++
Sbjct: 23  WMVVSETGESRVEDIDKHSIMQRTGLPTRDLRALDPKLSNPSSILGRE 70