Jatropha Genome Database

JcCB0173361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0173361.10 + phase: 0 
         (191 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g019000.1 Pyruvate decarboxylase/indolepyruvate decar...   361   e-100
IMGA|Medtr7g075640.1 Thiamine pyrophosphate enzyme, central regi...   353   3e-98
IMGA|Medtr7g075660.1 Pyruvate decarboxylase/indolepyruvate decar...   352   7e-98
IMGA|Medtr3g166930.1 Pyruvate decarboxylase/indolepyruvate decar...   343   3e-95
IMGA|Medtr5g048930.1 Pyruvate decarboxylase/indolepyruvate decar...   343   3e-95
IMGA|AC233100_56.1 Thiamine pyrophosphate enzyme, N-terminal TPP...   313   5e-86
IMGA|Medtr2g009380.1 Aminoacyl-tRNA synthetase, class I; Pyruvat...   272   8e-74
IMGA|Medtr5g048940.1 Pyruvate decarboxylase isozyme 2, putative ...    90   8e-19

>IMGA|Medtr2g019000.1 Pyruvate decarboxylase/indolepyruvate
           decarboxylase chr02_pseudomolecule_IMGAG_V3
           5120161-5123793 E EGN_Mt090430 20090702
          Length = 582

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/189 (89%), Positives = 177/189 (93%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           +E+LSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAA  KRV
Sbjct: 394 QELLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAATNKRV 453

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           IACIGDGSFQVTAQDISTMIR GQK+IIFLINNGGYTIEVEIHDGPYNVIKNWDYT  V+
Sbjct: 454 IACIGDGSFQVTAQDISTMIRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTRFVS 513

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           AIHN +GKCWTAKVRTEE L EAIATATG +K SLCFIEV  HKDDTSKELLEWGSRV+A
Sbjct: 514 AIHNGQGKCWTAKVRTEEDLIEAIATATGTEKDSLCFIEVFAHKDDTSKELLEWGSRVAA 573

Query: 183 ANSRPPNPQ 191
           ANSRPPNPQ
Sbjct: 574 ANSRPPNPQ 582


>IMGA|Medtr7g075640.1 Thiamine pyrophosphate enzyme, central region
           chr07_pseudomolecule_IMGAG_V3 15204059-15207241 E
           EGN_Mt090430 20090702
          Length = 570

 Score =  353 bits (905), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 164/189 (86%), Positives = 176/189 (93%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           ++MLS +TAVIAETGDSWFNCQKL+LPE CGYEFQMQYGSIGWSVGATLGYAQA   KRV
Sbjct: 382 QQMLSRETAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRV 441

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           IACIGDGSFQVTAQD+STM+R GQKTIIFLINNGGYTIEVEIHDGPYNVIKNW+YTGL++
Sbjct: 442 IACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLID 501

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           AIHN EGKCWT KV  EE+L EAIATATG +K SLCFIEV+VHKDDTSKELLEWGSRVSA
Sbjct: 502 AIHNGEGKCWTTKVFCEEELVEAIATATGPKKDSLCFIEVIVHKDDTSKELLEWGSRVSA 561

Query: 183 ANSRPPNPQ 191
           ANSRPPNPQ
Sbjct: 562 ANSRPPNPQ 570


>IMGA|Medtr7g075660.1 Pyruvate decarboxylase/indolepyruvate
           decarboxylase chr07_pseudomolecule_IMGAG_V3
           15223386-15226858 E EGN_Mt090430 20090702
          Length = 605

 Score =  352 bits (903), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 163/189 (86%), Positives = 175/189 (92%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           ++MLS +T VIAETGDSWFNCQKL+LPE CGYEFQMQYGSIGWSVGATLGYAQA   KRV
Sbjct: 417 QQMLSSETVVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRV 476

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           IACIGDGSFQVTAQD+STM+R GQKTIIFLINNGGYTIEVEIHDGPYNVIKNW+YTGL++
Sbjct: 477 IACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLID 536

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           AIHN EGKCWT KV  EE+L EAIATATG +K SLCFIEV+VHKDDTSKELLEWGSRVSA
Sbjct: 537 AIHNGEGKCWTTKVFCEEELVEAIATATGPKKDSLCFIEVIVHKDDTSKELLEWGSRVSA 596

Query: 183 ANSRPPNPQ 191
           ANSRPPNPQ
Sbjct: 597 ANSRPPNPQ 605


>IMGA|Medtr3g166930.1 Pyruvate decarboxylase/indolepyruvate
           decarboxylase chr03_pseudomolecule_IMGAG_V3
           43796566-43800597 E EGN_Mt090430 20090702
          Length = 607

 Score =  343 bits (880), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 159/189 (84%), Positives = 172/189 (91%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           + MLS +TAVIAETGDSWFNCQKL+LP+ CGYEFQMQYGSIGWSVGATLGYAQA   KRV
Sbjct: 419 QNMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRV 478

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           IACIGDGSFQVTAQD+STM+R GQKTIIFLINNGGYTIEVEIHDGPYNVIKNW+YTGLV+
Sbjct: 479 IACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVD 538

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           AIHN +G CWT KV  EE+L EAI TATG +K  LCFIEV+VHKDDTSKELLEWGSRVS+
Sbjct: 539 AIHNGQGHCWTTKVFCEEELVEAIETATGPKKDCLCFIEVIVHKDDTSKELLEWGSRVSS 598

Query: 183 ANSRPPNPQ 191
           ANSRPPNPQ
Sbjct: 599 ANSRPPNPQ 607


>IMGA|Medtr5g048930.1 Pyruvate decarboxylase/indolepyruvate
           decarboxylase chr05_pseudomolecule_IMGAG_V3
           20807626-20810741 E EGN_Mt090430 20090702
          Length = 616

 Score =  343 bits (880), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 159/189 (84%), Positives = 171/189 (90%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           + MLS +TAVIAETGDSWFNCQKL+LP+ CGYEFQMQYGSIGWSVGATLGYAQA   KRV
Sbjct: 428 QNMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRV 487

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           IACIGDGSFQVTAQD+STM+R GQKTIIFLINNGGYTIEVEIHDGPYNVIKNW+YTGLV+
Sbjct: 488 IACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVD 547

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           AIHN +G CWT KV  EE+L EAI TATG  K  LCFIEV+VHKDDTSKELLEWGSRVS+
Sbjct: 548 AIHNGQGHCWTTKVFCEEELVEAIETATGPMKNCLCFIEVIVHKDDTSKELLEWGSRVSS 607

Query: 183 ANSRPPNPQ 191
           ANSRPPNPQ
Sbjct: 608 ANSRPPNPQ 616


>IMGA|AC233100_56.1 Thiamine pyrophosphate enzyme, N-terminal TPP
           binding region AC233100.6 213439-209408 E EGN_Mt090430
           20090702
          Length = 593

 Score =  313 bits (801), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 148/189 (78%), Positives = 161/189 (85%), Gaps = 14/189 (7%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           + MLS +TAVIAETGDSWFNCQKL+LP+ CGYEFQMQYGSIGWSV              V
Sbjct: 419 QNMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSV--------------V 464

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           IACIGDGSFQVTAQD+STM+R GQKTIIFLINNGGYTIEVEIHDGPYNVIKNW+YTGLV+
Sbjct: 465 IACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVD 524

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           AIHN +G CWT KV  EE+L EAI TATG +K  LCFIEV+VHKDDTSKELLEWGSRVS+
Sbjct: 525 AIHNGQGHCWTTKVFCEEELVEAIETATGPKKDCLCFIEVIVHKDDTSKELLEWGSRVSS 584

Query: 183 ANSRPPNPQ 191
           ANSRPPNPQ
Sbjct: 585 ANSRPPNPQ 593


>IMGA|Medtr2g009380.1 Aminoacyl-tRNA synthetase, class I; Pyruvate
           decarboxylase/indolepyruvate decarboxylase
           chr02_pseudomolecule_IMGAG_V3 2055934-2058985 E
           EGN_Mt090430 20090702
          Length = 612

 Score =  272 bits (695), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 125/186 (67%), Positives = 150/186 (80%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           ++MLS D+AVIAE GD+WFN QKL+LP+ CGYE Q+QY S+GWS+GATLGYA++   KRV
Sbjct: 424 EKMLSCDSAVIAECGDAWFNSQKLKLPQGCGYECQLQYASLGWSIGATLGYAKSNPQKRV 483

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           IACIGDG FQV  Q++STM+R GQ  IIFLINNGGYT E EIHDGPYNVIKNW+Y GL+ 
Sbjct: 484 IACIGDGCFQVAGQEVSTMLRWGQNVIIFLINNGGYTTEAEIHDGPYNVIKNWNYAGLIE 543

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
            I N EGKC+TAKV  EE+L EAI T    +K  LCFIEV++HKDDTSKELL+ G+R++A
Sbjct: 544 TIDNGEGKCFTAKVHCEEELIEAINTTMESKKNCLCFIEVVMHKDDTSKELLQLGNRLAA 603

Query: 183 ANSRPP 188
            N R P
Sbjct: 604 LNGRLP 609


>IMGA|Medtr5g048940.1 Pyruvate decarboxylase isozyme 2, putative
           chr05_pseudomolecule_IMGAG_V3 20811535-20812493 E
           EGN_Mt090430 20090702
          Length = 169

 Score = 89.7 bits (221), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 47/57 (82%), Gaps = 1/57 (1%)

Query: 5   MLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWS-VGATLGYAQAARTK 60
           MLS +TAVIAET DSWFNCQKL+L + C YEFQMQYGSIGWS VGATLGY +A   K
Sbjct: 113 MLSSETAVIAETLDSWFNCQKLKLLKGCSYEFQMQYGSIGWSVVGATLGYVEAVPGK 169