Jatropha Genome Database

JcCB0164521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0164521.10 - phase: 0 /partial
         (141 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g028060.1 NB-ARC chr05_pseudomolecule_IMGAG_V3 115161...    51   2e-07
IMGA|Medtr5g028010.1 NB-ARC chr05_pseudomolecule_IMGAG_V3 114880...    51   2e-07
IMGA|Medtr5g027970.1 NB-ARC chr05_pseudomolecule_IMGAG_V3 114729...    50   5e-07
IMGA|Medtr3g094330.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 225751...    49   8e-07
IMGA|Medtr3g094420.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 225966...    49   1e-06
IMGA|Medtr5g028020.1 NB-ARC chr05_pseudomolecule_IMGAG_V3 114942...    48   2e-06
IMGA|Medtr3g040530.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 111123...    48   2e-06
IMGA|Medtr3g039400.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 104073...    48   2e-06
IMGA|Medtr3g093720.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 223267...    48   2e-06
IMGA|Medtr3g039250.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 103003...    47   3e-06
IMGA|Medtr5g028050.1 NB-ARC chr05_pseudomolecule_IMGAG_V3 115065...    47   4e-06
IMGA|Medtr3g039930.1 NB-ARC chr03_pseudomolecule_IMGAG_V3 107404...    46   6e-06
IMGA|Medtr4g155760.1 NB-ARC chr04_pseudomolecule_IMGAG_V3 385011...    45   9e-06

>IMGA|Medtr5g028060.1 NB-ARC chr05_pseudomolecule_IMGAG_V3
           11516153-11519924 E EGN_Mt090430 20090702
          Length = 951

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 58  TTFRSNYEKLPDFLKCCIDYCCICVR-YHIEKGKLVRLLLAEGLITEKPGEVMEDIASNV 116
           T    ++  LP +LK C  Y  +    Y I++ +L+RL +AEG I  K G+ MED+A + 
Sbjct: 409 TVLSLSFNDLPYYLKYCFLYLSMFPEDYLIQRMRLIRLWIAEGFIEAKSGKTMEDVAEDY 468

Query: 117 IAELIDLGMLR 127
           + ELI+  +L+
Sbjct: 469 LKELINRNLLQ 479


>IMGA|Medtr5g028010.1 NB-ARC chr05_pseudomolecule_IMGAG_V3
           11488034-11491453 H EGN_Mt090430 20090702
          Length = 944

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 63  NYEKLPDFLKCCIDYCCICVRYH-IEKGKLVRLLLAEGLITEKPGEVMEDIASNVIAELI 121
           ++ +LP  LK C+ Y  I   +H IE  +L+RLL+AEG +  + G+ +E++A   + EL+
Sbjct: 408 SFNELPYHLKSCLLYLSIFPEFHAIEHMRLIRLLIAEGFVNSENGKTLEEVADRYLKELL 467

Query: 122 DLGMLRQV 129
           +  +L+ V
Sbjct: 468 NRSLLQVV 475


>IMGA|Medtr5g027970.1 NB-ARC chr05_pseudomolecule_IMGAG_V3
           11472971-11469338 E EGN_Mt090430 20090702
          Length = 949

 Score = 49.7 bits (117), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 66  KLPDFLKCCIDYCCICVRYH-IEKGKLVRLLLAEGLITEKPGEVMEDIASNVIAELIDLG 124
           +LP +LK C+ Y  I   +H +E  +L+RL +AEG +  + G+ +E++A + + EL+D  
Sbjct: 416 ELPSYLKSCLMYLTIFPEFHAMETWRLIRLWIAEGFVNGEDGKTLEEVADSYLKELLDRS 475

Query: 125 MLRQV 129
           +++ V
Sbjct: 476 LIQVV 480


>IMGA|Medtr3g094330.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           22575183-22572125 E EGN_Mt090430 20090702
          Length = 905

 Score = 48.9 bits (115), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 62  SNYEKLPDFLKCCIDYCCICVRYH-IEKGKLVRLLLAEGLITEKP-GEVMEDIASNVIAE 119
           S+Y +LP +LK C  +C I  + H IEKG L+ L +AEGL+     G+  EDI      E
Sbjct: 194 SSYIRLPPYLKRCFSFCAIFPKGHKIEKGNLIYLWMAEGLLPRSTMGKRAEDIGEECFEE 253

Query: 120 LIDLGMLRQVLDGF 133
           L+         D F
Sbjct: 254 LVSKTFFHHTSDDF 267


>IMGA|Medtr3g094420.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           22596607-22590199 E EGN_Mt090430 20090702
          Length = 1110

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 62  SNYEKLPDFLKCCIDYCCICVRYH-IEKGKLVRLLLAEGLITEKP-GEVMEDIASNVIAE 119
           S+Y +LP +LK C  +C I  + H IEKG L+ L +AEGL+     G+  EDI      E
Sbjct: 399 SSYIRLPPYLKRCFSFCAIFPKGHKIEKGNLIYLWMAEGLLPRSTMGKRAEDIGEECFEE 458

Query: 120 LIDLGMLRQVLDGF 133
           L+         D F
Sbjct: 459 LVSKTFFHHTSDDF 472


>IMGA|Medtr5g028020.1 NB-ARC chr05_pseudomolecule_IMGAG_V3
           11494236-11497607 H EGN_Mt090430 20090702
          Length = 946

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 58  TTFRSNYEKLPDFLKCCIDYCCICVR-YHIEKGKLVRLLLAEGLITEKPGEVMEDIASNV 116
           T    ++  LP +LK C  Y  +    Y I++ +L+RL +AEG I    G+ MEDIA + 
Sbjct: 408 TVLSLSFNDLPHYLKYCFLYLSMFPEDYLIQRMRLIRLWIAEGFIKAGEGKTMEDIAEDY 467

Query: 117 IAELIDLGMLR 127
           + +LI+  +L+
Sbjct: 468 LKKLINRNLLQ 478


>IMGA|Medtr3g040530.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           11112386-11116144 E EGN_Mt090430 20090702
          Length = 1252

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 63  NYEKLPDFLKCCIDYCCICVR-YHIEKGKLVRLLLAEGLITE-KPGEVMEDIASNVIAEL 120
           +Y+ LP  LK C  YC I  + Y +++ KLV L +AEG I   + G+ ME++     +EL
Sbjct: 415 SYQYLPSQLKRCFSYCSIFPKDYTLDRKKLVLLWMAEGFIDHSQDGKAMEEVGDECFSEL 474

Query: 121 IDLGMLRQVLD 131
           +   +++Q+ D
Sbjct: 475 LSRSLIQQLYD 485


>IMGA|Medtr3g039400.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           10407307-10411201 E EGN_Mt090430 20090702
          Length = 1293

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 57  LTTFRSNYEKLPDFLKCCIDYCCICVRYHI-EKGKLVRLLLAEGLITEKPGE-VMEDIAS 114
           L T   +Y+ LP  LK C  YC I  + H  ++ KLV L +AEG +    GE  ME++  
Sbjct: 414 LPTLHLSYQCLPSHLKICFAYCSIFPKGHTHDRKKLVLLWMAEGFLDYSHGEKTMEELGD 473

Query: 115 NVIAELIDLGMLRQVLD 131
           +  AEL+   +++Q  D
Sbjct: 474 DCFAELLSRSLIQQSND 490


>IMGA|Medtr3g093720.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           22326711-22331120 E EGN_Mt090430 20090702
          Length = 768

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 62  SNYEKLPDFLKCCIDYCCICVRYH-IEKGKLVRLLLAEGLITEKP-GEVMEDIASNVIAE 119
           S+Y +LP +LK C  +C I  + H IEKG L+ L +AEGL+     G+  EDI      E
Sbjct: 399 SSYIRLPPYLKRCFSFCAIFPKGHKIEKGNLIYLWMAEGLLPRSTMGKRAEDIGEECFEE 458

Query: 120 LI 121
           L+
Sbjct: 459 LV 460


>IMGA|Medtr3g039250.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           10300346-10305741 E EGN_Mt090430 20090702
          Length = 1293

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 57  LTTFRSNYEKLPDFLKCCIDYCCICVRYH-IEKGKLVRLLLAEGLITEKPGE-VMEDIAS 114
           L     +Y+ LP  LK C  YC I  + H +++ KLV L +AEG +    GE  ME++  
Sbjct: 410 LPALHLSYQCLPSHLKICFAYCSIFPKGHTLDRKKLVLLWMAEGFLDYSHGEKTMEELGG 469

Query: 115 NVIAELIDLGMLRQVLD 131
           +  AEL+   +++Q  D
Sbjct: 470 DCFAELLSRSLIQQSND 486


>IMGA|Medtr5g028050.1 NB-ARC chr05_pseudomolecule_IMGAG_V3
           11506525-11509944 E EGN_Mt090430 20090702
          Length = 940

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 1/68 (1%)

Query: 63  NYEKLPDFLKCCIDYCCICVRYH-IEKGKLVRLLLAEGLITEKPGEVMEDIASNVIAELI 121
           ++ +LP  LK C+ Y  +   +H IE  +L+RL +AEG +  + G+ +E++A   + EL+
Sbjct: 410 SFNELPYHLKSCLLYLSVFPEFHAIEHMRLIRLWVAEGFVNGEDGKTLEEVADRYLKELL 469

Query: 122 DLGMLRQV 129
           +  +L+ V
Sbjct: 470 NRSLLQVV 477


>IMGA|Medtr3g039930.1 NB-ARC chr03_pseudomolecule_IMGAG_V3
           10740494-10745401 E EGN_Mt090430 20090702
          Length = 1248

 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 57  LTTFRSNYEKLPDFLKCCIDYCCICVR-YHIEKGKLVRLLLAEGLITEKPGE-VMEDIAS 114
           L     +Y+ LP  LK C  YC I  + Y +E+ KLV L +AEG +     E  ME+I  
Sbjct: 408 LPALHLSYQYLPSHLKRCFAYCSIFPKDYPLERKKLVLLWMAEGFLDYSQDENAMEEIGD 467

Query: 115 NVIAELIDLGMLRQV 129
           +  AEL+   +++Q+
Sbjct: 468 DCFAELLSRSLIQQL 482


>IMGA|Medtr4g155760.1 NB-ARC chr04_pseudomolecule_IMGAG_V3
           38501145-38503824 E EGN_Mt090430 20090702
          Length = 722

 Score = 45.4 bits (106), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 63  NYEKLPDFLKCCIDYCCICVR-YHIEKGKLVRLLLAEGLITEKPGE-VMEDIASNVIAEL 120
           +Y+ LP  LK C  YC I  + Y + K K+V L +AEG +    GE V E++  +  AEL
Sbjct: 344 DYQYLPSHLKRCFAYCSIFPKGYLLAKKKMVLLWMAEGFLDISQGEKVAEEVVYDCFAEL 403

Query: 121 IDLGMLRQVLD 131
           +   +++Q+ D
Sbjct: 404 LSRSLIQQLSD 414