Jatropha Genome Database
- JcCB0161621.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0161621.10 - phase: 0 /partial
(182 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3 19... 225 7e-60
IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3 21... 224 2e-59
IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3 87... 221 2e-58
IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32... 214 1e-56
IMGA|Medtr6g099230.1 Ras small GTPase, Rab type chr06_pseudomole... 187 2e-48
IMGA|Medtr3g086620.1 Ras small GTPase, Rab type; chr03_pseudomol... 69 1e-12
IMGA|Medtr2g097820.1 Sigma-54 factor, interaction region; Ras sm... 68 3e-12
IMGA|Medtr5g014080.1 Ras small GTPase, Rab type; chr05_pseudomol... 66 8e-12
IMGA|Medtr5g084520.1 Ras small GTPase, Rab type; chr05_pseudomol... 66 1e-11
IMGA|Medtr2g132410.2 Ras GTPase chr02_pseudomolecule_IMGAG_V3 32... 65 1e-11
IMGA|Medtr8g029570.1 Ras small GTPase, Rab type; chr08_pseudomol... 65 3e-11
IMGA|Medtr3g092520.1 Sigma-54 factor, interaction region; Ras sm... 65 3e-11
IMGA|Medtr2g005340.1 Sigma-54 factor, interaction region; Ras sm... 63 8e-11
IMGA|Medtr2g005330.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3 18... 63 1e-10
IMGA|Medtr7g093170.1 Ras GTPase; Sigma-54 factor, interaction re... 63 1e-10
IMGA|Medtr2g091780.1 Sigma-54 factor, interaction region; Ras sm... 62 1e-10
IMGA|Medtr4g109180.1 Sigma-54 factor, interaction region; Ras sm... 62 2e-10
IMGA|Medtr2g018470.1 Sigma-54 factor, interaction region; Ras sm... 62 2e-10
IMGA|Medtr4g158780.1 Ras small GTPase, Rab type; chr04_pseudomol... 62 2e-10
IMGA|Medtr1g081200.2 Ras small GTPase, Rab type chr01_pseudomole... 62 2e-10
IMGA|Medtr1g081200.3 Sigma-54 factor, interaction region; Ras sm... 62 2e-10
IMGA|Medtr1g081200.1 Sigma-54 factor, interaction region; Ras sm... 61 2e-10
IMGA|Medtr1g081210.1 Ras small GTPase, Rab type chr01_pseudomole... 61 3e-10
IMGA|Medtr7g118430.1 Ras GTPase; Sigma-54 factor, interaction re... 61 3e-10
IMGA|Medtr3g143270.1 Ras GTPase; Sigma-54 factor, interaction re... 60 9e-10
IMGA|Medtr2g123110.1 Ras small GTPase, Rab type; chr02_pseudomol... 59 1e-09
IMGA|Medtr3g101960.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3 2... 59 2e-09
IMGA|Medtr2g114540.1 Sigma-54 factor, interaction region; Ras sm... 57 5e-09
IMGA|Medtr6g022720.1 Sigma-54 factor, interaction region; Ras sm... 57 6e-09
IMGA|Medtr7g046180.1 Ras-related protein ARA-1, putative chr07_p... 57 7e-09
IMGA|Medtr2g132390.1 Sigma-54 factor, interaction region; Ras sm... 56 1e-08
IMGA|Medtr4g078950.1 Sigma-54 factor, interaction region; Ras sm... 55 2e-08
IMGA|Medtr2g033230.1 Sigma-54 factor, interaction region; Ras sm... 54 4e-08
IMGA|Medtr3g136520.2 Ras small GTPase, Rab type chr03_pseudomole... 52 2e-07
IMGA|Medtr1g099480.1 Calcium-binding EF-hand; chr01_pseudomolecu... 52 2e-07
IMGA|Medtr4g142850.1 Sigma-54 factor, interaction region; Ras sm... 51 3e-07
IMGA|Medtr3g136520.1 Ras small GTPase, Rab type chr03_pseudomole... 51 3e-07
IMGA|Medtr3g136510.1 Ras small GTPase, Rab type chr03_pseudomole... 51 3e-07
IMGA|Medtr3g136510.2 Ras small GTPase, Rab type chr03_pseudomole... 51 3e-07
IMGA|Medtr3g136500.1 Ras small GTPase, Rab type chr03_pseudomole... 51 4e-07
IMGA|Medtr8g034870.1 Sigma-54 factor, interaction region; Ras sm... 50 6e-07
IMGA|Medtr4g141030.1 Sigma-54 factor, interaction region; Ras sm... 50 7e-07
IMGA|Medtr3g073500.1 Sigma-54 factor, interaction region; Ras sm... 49 2e-06
IMGA|Medtr8g034810.1 Ras small GTPase, Rab type chr08_pseudomole... 48 2e-06
IMGA|Medtr8g119380.1 Ras small GTPase, Rab type chr08_pseudomole... 46 8e-06
>IMGA|Medtr8g089410.1 Ras GTPase chr08_pseudomolecule_IMGAG_V3
19209541-19213679 F EGN_Mt090430 20090702
Length = 197
Score = 225 bits (574), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 109/109 (100%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNFSANVVV+GSTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASY
Sbjct: 34 DYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
ENV+KKWIPEL+HYAPGVPIILVGTKLDLRDDKQFF+DHPGAVPITTAQ
Sbjct: 94 ENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQ 142
>IMGA|Medtr4g098540.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3
21246015-21242846 F EGN_Mt090430 20090702
Length = 197
Score = 224 bits (571), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 106/109 (97%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNFSANVVVDGST+NLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY
Sbjct: 34 DYVPTVFDNFSANVVVDGSTINLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
EN+AKKWIPELRHYAPGVPIILVGTKLDLRDD QFF DHPGA PITTAQ
Sbjct: 94 ENIAKKWIPELRHYAPGVPIILVGTKLDLRDDSQFFQDHPGAAPITTAQ 142
>IMGA|Medtr5g022500.1 Ras GTPase chr05_pseudomolecule_IMGAG_V3
8775550-8778414 E EGN_Mt090430 20090702
Length = 197
Score = 221 bits (562), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 103/109 (94%), Positives = 107/109 (98%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNFSANVVV+GS VNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASY
Sbjct: 34 DYVPTVFDNFSANVVVNGSIVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
ENV+KKWIPEL+HYAPGVPIILVGTKLDLRDDKQF IDHPGAVPITTAQ
Sbjct: 94 ENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFCIDHPGAVPITTAQ 142
>IMGA|Medtr2g132410.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3
32003647-32002013 E EGN_Mt090430 20090702
Length = 196
Score = 214 bits (546), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 97/109 (88%), Positives = 105/109 (96%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL+S+ASY
Sbjct: 34 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLLSRASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
EN++KKWIPELRHYAP VPI+LVGTKLDLR+D+Q+ IDHPGA ITTAQ
Sbjct: 94 ENISKKWIPELRHYAPTVPIVLVGTKLDLREDRQYLIDHPGATAITTAQ 142
>IMGA|Medtr6g099230.1 Ras small GTPase, Rab type
chr06_pseudomolecule_IMGAG_V3 21851607-21855202 F
EGN_Mt090430 20090702
Length = 209
Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 98/109 (89%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DY+PTVFDNFSANV VDGS VNLGLWDTAGQEDY+RLRPLSYRGAD+F+LAFSLIS+ASY
Sbjct: 34 DYIPTVFDNFSANVAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
ENV KKW+PELR +AP VPI+LVGTKLDLR+D+ +F DH G IT+A+
Sbjct: 94 ENVLKKWMPELRRFAPNVPIVLVGTKLDLREDRGYFADHTGYNVITSAE 142
>IMGA|Medtr3g086620.1 Ras small GTPase, Rab type;
chr03_pseudomolecule_IMGAG_V3 20313622-20319074 E
EGN_Mt090430 20090702
Length = 200
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 49 FSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIP 108
FS + V+ +TV +WDTAGQE Y+ L P+ YRGA ++ + + S S+ AKKW+
Sbjct: 48 FSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFSR-AKKWVQ 106
Query: 109 ELRHYA-PGVPIILVGTKLDLRDDKQ 133
EL+ P + + L G K DL D ++
Sbjct: 107 ELQKQGNPNMVMALAGNKSDLEDKRK 132
>IMGA|Medtr2g097820.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
22987161-22993145 E EGN_Mt090430 20090702
Length = 218
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 50 SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE 109
+ ++ VD + +WDTAGQE Y + YRGA LL + + +A++EN A +W+ E
Sbjct: 52 TKSLTVDAKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAA-RWLKE 110
Query: 110 LR-HYAPGVPIILVGTKLDLR 129
LR H P + ++L+G K DLR
Sbjct: 111 LRDHTDPNIVVMLIGNKSDLR 131
>IMGA|Medtr5g014080.1 Ras small GTPase, Rab type;
chr05_pseudomolecule_IMGAG_V3 4443349-4447486 E
EGN_Mt090430 20090702
Length = 223
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 17 FCLNQYIFETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNR 75
F +Q + +T +F+Y + Y T+ D S + ++ TV L LWDTAGQE +
Sbjct: 14 FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 73
Query: 76 LRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQF 134
L P R + V ++ + + S+ ++ N KWI E+R V I+LVG K DL + +
Sbjct: 74 LIPSYIRDSSVAVIVYDVASRQTFLNTT-KWIEEVRTERGSDVIIVLVGNKTDLVEKRLI 132
Query: 135 FIDHP 139
I +P
Sbjct: 133 LILNP 137
>IMGA|Medtr5g084520.1 Ras small GTPase, Rab type;
chr05_pseudomolecule_IMGAG_V3 32172903-32178330 E
EGN_Mt090430 20090702
Length = 200
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 49 FSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIP 108
FS + V+ +TV +WDTAGQE Y+ L P+ YRGA ++ + + + S+ AKKW+
Sbjct: 48 FSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNLESFTR-AKKWVQ 106
Query: 109 ELRHYA-PGVPIILVGTKLDLRDDKQ 133
EL+ P + + G K DL D ++
Sbjct: 107 ELQKQGNPNMVVAFAGNKADLEDKRK 132
>IMGA|Medtr2g132410.2 Ras GTPase chr02_pseudomolecule_IMGAG_V3
32003647-32002723 E EGN_Mt090430 20090702
Length = 67
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 30/33 (90%)
Query: 39 QDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQE 71
DYVPTVFDNFSANVVVDGSTVNLGLWDTAG
Sbjct: 33 TDYVPTVFDNFSANVVVDGSTVNLGLWDTAGNH 65
>IMGA|Medtr8g029570.1 Ras small GTPase, Rab type;
chr08_pseudomolecule_IMGAG_V3 6558177-6560109 E
EGN_Mt090430 20090702
Length = 216
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 45 VFDNFSAN--VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENV 102
+ FS N V ++G + +WDTAGQE Y + YRGA +L + + + S+++V
Sbjct: 42 ILSRFSKNETVTINGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHV 101
Query: 103 AKKWIPELRHYAP-GVPIILVGTKLDLRD 130
A KW+ ELR +A + I+LVG K DL D
Sbjct: 102 A-KWVEELRAHADNSIVIMLVGNKGDLVD 129
>IMGA|Medtr3g092520.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr03_pseudomolecule_IMGAG_V3
21753746-21751718 E EGN_Mt090430 20090702
Length = 216
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRH 112
+ V+G TV +WDTAGQE Y + YRGA LL + + + ++ENV ++W+ ELR
Sbjct: 54 IQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENV-QRWLRELRD 112
Query: 113 YA-PGVPIILVGTKLDL 128
+A + I+L G K DL
Sbjct: 113 HADSNIVIMLAGNKSDL 129
>IMGA|Medtr2g005340.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
188745-187533 F EGN_Mt090430 20090702
Length = 220
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA 114
V+G TV +WDTAGQE Y + YRGA LL + + +++NV +W+ ELR +A
Sbjct: 59 VEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVT-RWLKELRDHA 117
Query: 115 -PGVPIILVGTKLDLR-------DDKQFFIDHPG 140
+ I+L+G K DL+ +D Q + + G
Sbjct: 118 DANIVIMLIGNKTDLKHLRAVATEDAQSYAEKEG 151
>IMGA|Medtr2g005330.1 Ras GTPase chr02_pseudomolecule_IMGAG_V3
184635-185968 F EGN_Mt090430 20090702
Length = 203
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 41 YVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
Y+ T+ +F V ++G T L +WDTAGQE + + YRGA ++ + + S+
Sbjct: 38 YISTIGVDFKIRTVELEGKTAKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDIESF 97
Query: 100 ENVAKKWIPELRHYAP-GVPIILVGTKLDLRDDK 132
NV K+W+ E+ YA V +LVG K DL D+K
Sbjct: 98 NNV-KQWLHEIDRYANHSVSKLLVGNKCDLTDNK 130
>IMGA|Medtr7g093170.1 Ras GTPase; Sigma-54 factor, interaction
region chr07_pseudomolecule_IMGAG_V3 20752031-20755936 F
EGN_Mt090430 20090702
Length = 202
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 41 YVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
Y+ T+ +F V DG T+ L +WDTAGQE + + YRGA ++ + + + S+
Sbjct: 37 YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESF 96
Query: 100 ENVAKKWIPELRHYAP-GVPIILVGTKLDLRDDKQFFIDHPGA 141
NV K+W+ E+ YA V +LVG K DL ++ D A
Sbjct: 97 NNV-KQWLSEIDRYASDNVNKLLVGNKCDLTSERAVSYDTAKA 138
>IMGA|Medtr2g091780.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
20763526-20767375 E EGN_Mt090430 20090702
Length = 217
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HY 113
VD + +WDTAGQE Y + YRGA LL + + A++ENV +W+ ELR H
Sbjct: 57 VDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENV-DRWLKELRNHT 115
Query: 114 APGVPIILVGTKLDLR 129
+ ++LVG K DLR
Sbjct: 116 DSNIVVMLVGNKADLR 131
>IMGA|Medtr4g109180.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr04_pseudomolecule_IMGAG_V3
24355316-24353037 E EGN_Mt090430 20090702
Length = 217
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HY 113
VD V +WDTAGQE Y + YRGA LL + + ++ENV ++W+ ELR H
Sbjct: 57 VDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHT 115
Query: 114 APGVPIILVGTKLDLR-------DDKQFFIDHP 139
+ I+LVG K DLR DD + F +
Sbjct: 116 DANIVIMLVGNKADLRHLRAVSTDDAKAFAERE 148
>IMGA|Medtr2g018470.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
4871209-4868238 F EGN_Mt090430 20090702
Length = 217
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 52 NVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR 111
++ VD V +WDTAGQE Y + YRGA LL + + ++ENV ++W+ ELR
Sbjct: 54 SIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELR 112
Query: 112 -HYAPGVPIILVGTKLDLR 129
H + ++LVG K DLR
Sbjct: 113 DHTDANIVVMLVGNKADLR 131
>IMGA|Medtr4g158780.1 Ras small GTPase, Rab type;
chr04_pseudomolecule_IMGAG_V3 39962115-39963689 E
EGN_Mt090430 20090702
Length = 190
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 49 FSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIP 108
F+ + ++ +TV +WDTAGQE Y+ L P+ YRG+ ++ + + S S+ AKKW+
Sbjct: 39 FTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGSAAAIVVYDITSMDSFVR-AKKWVR 97
Query: 109 ELRHYA-PGVPIILVGTKLDLRDDKQ 133
E++ A P + ++LV K DL D ++
Sbjct: 98 EVQRQANPNLIMLLVANKADLEDQRK 123
>IMGA|Medtr1g081200.2 Ras small GTPase, Rab type
chr01_pseudomolecule_IMGAG_V3 16060257-16053471 E
EGN_Mt090430 20090702
Length = 181
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ K WI + +
Sbjct: 22 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQ 80
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
H + V ILVG K D+ + K+ AVP + Q
Sbjct: 81 HASDNVNKILVGNKADMDESKR-------AVPTSKGQA 111
>IMGA|Medtr1g081200.3 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr01_pseudomolecule_IMGAG_V3
16060257-16054311 E EGN_Mt090430 20090702
Length = 171
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ K WI + +
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQ 115
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDH 138
H + V ILVG K D+ + K+ + H
Sbjct: 116 HASDNVNKILVGNKADMDESKRVCLTH 142
>IMGA|Medtr1g081200.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr01_pseudomolecule_IMGAG_V3
16060257-16053471 E EGN_Mt090430 20090702
Length = 216
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ K WI + +
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQ 115
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
H + V ILVG K D+ + K+ AVP + Q
Sbjct: 116 HASDNVNKILVGNKADMDESKR-------AVPTSKGQA 146
>IMGA|Medtr1g081210.1 Ras small GTPase, Rab type
chr01_pseudomolecule_IMGAG_V3 16067992-16061303 E
EGN_Mt090430 20090702
Length = 181
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ K WI + +
Sbjct: 22 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQ 80
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
H + V ILVG K D+ + K+ AVP + Q
Sbjct: 81 HASDNVNKILVGNKADMDESKR-------AVPTSKGQA 111
>IMGA|Medtr7g118430.1 Ras GTPase; Sigma-54 factor, interaction
region chr07_pseudomolecule_IMGAG_V3 27950642-27953739 F
EGN_Mt090430 20090702
Length = 216
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ + WI + +
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQ 115
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
H + V ILVG K D+ + K+ AVP + Q
Sbjct: 116 HASDNVNKILVGNKADMDESKR-------AVPTSKGQA 146
>IMGA|Medtr3g143270.1 Ras GTPase; Sigma-54 factor, interaction
region; chr03_pseudomolecule_IMGAG_V3 36921743-36915347
E EGN_Mt090430 20090702
Length = 207
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 39 QDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKA 97
++ PT+ +F +DG + L +WDTAGQE + L YRGA ++A+ + +
Sbjct: 38 ENLSPTIGVDFKVKYFTIDGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRD 97
Query: 98 SYENVAKKWIPELRHYAPGVPII--LVGTKLDLRDDK 132
++ N+++ W E+ Y+ I LVG K+D D+
Sbjct: 98 TFTNLSEVWAKEVDLYSTNQDCIKMLVGNKVDKESDR 134
>IMGA|Medtr2g123110.1 Ras small GTPase, Rab type;
chr02_pseudomolecule_IMGAG_V3 29724457-29722809 E
EGN_Mt090430 20090702
Length = 200
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 39 QDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKA 97
Q+ PT+ F ++ + +TV +WDTAGQE Y+ L P+ YRGA ++ + + S
Sbjct: 37 QNQEPTIGAAFFTQILSLSEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDISSID 96
Query: 98 SYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQ 133
++ AKKW+ EL RH + + + LV K DL ++
Sbjct: 97 TFVR-AKKWVQELQRHGSQKLVMALVANKCDLEPKRE 132
>IMGA|Medtr3g101960.1 Ras GTPase; chr03_pseudomolecule_IMGAG_V3
24774853-24778399 E EGN_Mt090430 20090702
Length = 222
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRH 112
+V++ +V +WDTAGQE Y + YRGA +L + + + S++++ +W+ ELR+
Sbjct: 58 LVIEHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIP-RWLEELRN 116
Query: 113 YA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
+A + IIL+G K DL + + AVP A+
Sbjct: 117 HADKNIVIILIGNKSDLEEQR--------AVPTEDAK 145
>IMGA|Medtr2g114540.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr02_pseudomolecule_IMGAG_V3
27107054-27104346 E EGN_Mt090430 20090702
Length = 213
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 31 KFLYHFVEQDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLL 89
+F + Y+ T+ ++ + +DG + L +WDTAGQE + + YRGA LL
Sbjct: 34 RFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTAYYRGAMGILL 93
Query: 90 AFSLISKASYENVAKKWIPELRHYAPG--VPIILVGTKLDLRDDKQFFIDHPGAVPITTA 147
+ + ++S+ N+ WI + ++ V ILVG K+D+ + K+ AVP +
Sbjct: 94 VYDVTDESSFNNIT-NWIRSIEQHSSDNIVNKILVGNKVDMDESKR-------AVPFSKG 145
Query: 148 QV 149
Q
Sbjct: 146 QA 147
>IMGA|Medtr6g022720.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr06_pseudomolecule_IMGAG_V3
5114319-5120121 E EGN_Mt090430 20090702
Length = 211
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 32 FLYHFVEQDYVP----TVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADV 86
L F ++ + P T+ F A ++ +D + L +WDTAGQE + + YRGA
Sbjct: 22 LLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIWDTAGQESFRSITRSYYRGAAG 81
Query: 87 FLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDL 128
LL + + + ++ ++A W+ + R +A P + I L+G K DL
Sbjct: 82 ALLVYDITRRETFNHLA-SWLEDARQHANPNMTITLIGNKCDL 123
>IMGA|Medtr7g046180.1 Ras-related protein ARA-1, putative
chr07_pseudomolecule_IMGAG_V3 11284278-11288236 F
EGN_Mt090430 20090702
Length = 215
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
V +DG V +WDTAGQE + + YRGA L+ + + + ++E++ K+W+ EL
Sbjct: 55 VEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAFGALVVYDISRRGTFESI-KRWLDELTT 113
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVP 143
V +LVG K DL + ++ I+ A+
Sbjct: 114 QNDSTVARMLVGNKCDLENIREVSIEEGKALA 145
>IMGA|Medtr2g132390.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr02_pseudomolecule_IMGAG_V3
31999589-31997335 F EGN_Mt090430 20090702
Length = 215
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 60 VNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVP 118
V +WDTAGQE Y + YRGA LL + ++ENV ++W+ ELR H V
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENV-ERWLKELRDHTDAYVV 118
Query: 119 IILVGTKLDLR 129
I+LVG K DL+
Sbjct: 119 IMLVGNKADLK 129
>IMGA|Medtr4g078950.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
15573426-15577863 E EGN_Mt090430 20090702
Length = 216
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRL--RPLSYRGADVFLLAFSLISKASYENVAKKWIPEL 110
+ +DG + L +WDTAGQE ++ + YRGA LL + + +AS+ N+ + WI +
Sbjct: 57 IELDGKRIKLQIWDTAGQERFSFVINNFTYYRGAMGILLVYDVTDEASFNNI-RNWIRNI 115
Query: 111 -RHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
+H + V ILVG K D+ + K+ AVP + Q
Sbjct: 116 EQHASDNVNKILVGNKADMDESKR-------AVPTSKGQA 148
>IMGA|Medtr2g033230.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr02_pseudomolecule_IMGAG_V3
9016235-9019888 F EGN_Mt090430 20090702
Length = 211
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 32 FLYHFVEQDYVP----TVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADV 86
L F ++ + P T+ F A ++ +D + L +WDTAGQE + + YRGA
Sbjct: 22 LLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAG 81
Query: 87 FLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDL 128
LL + + + ++ ++A W+ + R +A + I+L+G K DL
Sbjct: 82 ALLVYDITRRETFNHLA-SWLEDARQHANANMTIMLIGNKCDL 123
>IMGA|Medtr3g136520.2 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34476760-34478596 E
EGN_Mt090430 20090702
Length = 199
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 25 ETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRG 83
+T F K+ L E+ Y PT+ + + + + WDTAGQE + LR Y
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 84 ADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD 130
++ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 86 GQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKN 131
>IMGA|Medtr1g099480.1 Calcium-binding EF-hand;
chr01_pseudomolecule_IMGAG_V3 20333411-20342012 E
EGN_Mt090430 20090702
Length = 230
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 47 DNFSANV--VVDGSTVNLGLW---------DTAGQ-EDYNRLRPLSYRGADVFLLAFSLI 94
+NF NV V+ +T+ + L+ DT+ + D NR+ R AD +L ++
Sbjct: 39 ENFRPNVAPVLPPTTLAVDLYPDRVPITIIDTSSRVADSNRVAEELQR-ADTVVLTYACD 97
Query: 95 SKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQ 133
+ EN++ W+P LR+ VP+I+VG KLDLRD+ Q
Sbjct: 98 RPETLENLSTVWLPHLRNLEVNVPVIVVGCKLDLRDENQ 136
>IMGA|Medtr4g142850.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type; chr04_pseudomolecule_IMGAG_V3
35680571-35684293 E EGN_Mt090430 20090702
Length = 217
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 40 DYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLA-------- 90
D PT+ +F V ++G + L +WDTAGQE + L YRGA ++
Sbjct: 40 DLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMGNISWKQLV 99
Query: 91 -FSLISKASYENVAKKWIPELRHYAPGVPI--ILVGTKLDLRDDK 132
+ + + ++ N+++ W E+ Y+ +LVG K+D D+
Sbjct: 100 FYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVDKEGDR 144
>IMGA|Medtr3g136520.1 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34476760-34479459 E
EGN_Mt090430 20090702
Length = 221
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 25 ETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRG 83
+T F K+ L E+ Y PT+ + + + + WDTAGQE + LR Y
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 84 ADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD 130
++ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 86 GQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKN 131
>IMGA|Medtr3g136510.1 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34466034-34474773 E
EGN_Mt090430 20090702
Length = 221
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 25 ETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRG 83
+T F K+ L E+ Y PT+ + + + + WDTAGQE + LR Y
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 84 ADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD 130
++ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 86 GQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKN 131
>IMGA|Medtr3g136510.2 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34471191-34474773 E
EGN_Mt090430 20090702
Length = 221
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 25 ETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRG 83
+T F K+ L E+ Y PT+ + + + + WDTAGQE + LR Y
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 84 ADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD 130
++ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 86 GQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKN 131
>IMGA|Medtr3g136500.1 Ras small GTPase, Rab type
chr03_pseudomolecule_IMGAG_V3 34466034-34470742 E
EGN_Mt090430 20090702
Length = 221
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 25 ETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRG 83
+T F K+ L E+ Y PT+ + + + + WDTAGQE + LR Y
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 84 ADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD 130
++ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 86 GQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKN 131
>IMGA|Medtr8g034870.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr08_pseudomolecule_IMGAG_V3
7638438-7637794 E EGN_Mt090430 20090702
Length = 215
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA 114
++ ++V L +WDTAGQE + + YR A LL + + + +++++A W+ + R +A
Sbjct: 50 INNNSVKLQIWDTAGQERFRSITRSYYRKAAGALLVYDITRRETFDHMA-TWLEDARQHA 108
Query: 115 PG-VPIILVGTKLDLRDDK 132
+ I+LVG K DL ++
Sbjct: 109 SSDMIIMLVGNKSDLAGNR 127
>IMGA|Medtr4g141030.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr04_pseudomolecule_IMGAG_V3
34720246-34722755 E EGN_Mt090430 20090702
Length = 209
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 11 VLLSVQFCLNQYIFETKFDKKFLYHFVEQDYVPTVFDNF-SANVVVDGSTVNLGLWDTAG 69
LL V + + +T +++Y Q Y T+ +F + ++VD V L +WDTAG
Sbjct: 11 TLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKLVTLQIWDTAG 70
Query: 70 QEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAPG----VPIILVGT 124
QE ++ L YRGAD +L + + +++ + W + L+ G P +L+G
Sbjct: 71 QERFHSLGAAFYRGADCCVLVYDVNIHKTFDTL-NNWHDDFLKQADTGNPDAFPFVLLGN 129
Query: 125 KLDL 128
K+D+
Sbjct: 130 KVDV 133
>IMGA|Medtr3g073500.1 Sigma-54 factor, interaction region; Ras small
GTPase, Rab type chr03_pseudomolecule_IMGAG_V3
17019246-17019911 H EGN_Mt090430 20090702
Length = 221
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA 114
++ + V L +WDTAGQE + + YR A LL + + + ++ ++A W+ + R +A
Sbjct: 50 INNNPVKLQIWDTAGQERFRSITKSYYRKAACALLVYDITRRETFNHLA-TWLEDARQHA 108
Query: 115 PG-VPIILVGTKLDL 128
+ I+L+G K DL
Sbjct: 109 SSDMIIMLIGNKSDL 123
>IMGA|Medtr8g034810.1 Ras small GTPase, Rab type
chr08_pseudomolecule_IMGAG_V3 7613157-7612519 E
EGN_Mt090430 20090702
Length = 187
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRH 112
+ ++ + V L +WDTAGQE ++ + YR A LL + + + +++++A W+ + R
Sbjct: 48 ININNNPVKLQIWDTAGQERFSSITKSYYRKAADALLVYDITRRETFDHMA-TWLEDARQ 106
Query: 113 YAPGVPII-LVGTKLDL 128
+A II L+G K DL
Sbjct: 107 HASSDTIIMLIGNKSDL 123
>IMGA|Medtr8g119380.1 Ras small GTPase, Rab type
chr08_pseudomolecule_IMGAG_V3 27037538-27039563 E
EGN_Mt090430 20090702
Length = 241
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 25 ETKFDKKFLYHFVEQDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGA 84
+T F K+ L E++ +++F N + WDTAGQ + LR Y
Sbjct: 55 KTTFVKRHLTGEFERE----KYEHFYTNC----GKIRFNCWDTAGQGKFGGLRDAYYTQG 106
Query: 85 DVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD 130
++ F + ++ +Y+NV W ++ +PI+L G K+D+++
Sbjct: 107 QCAIIMFDVTARLTYKNVP-TWHGDITRVCENIPIVLCGNKVDVKN 151