Jatropha Genome Database

JcCB0161221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0161221.10 - phase: 0 
         (132 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g101010.1 UBA/THIF-type NAD/FAD binding fold; Rhodane...   124   1e-29

>IMGA|Medtr5g101010.1 UBA/THIF-type NAD/FAD binding fold;
           Rhodanese-like chr05_pseudomolecule_IMGAG_V3
           40405967-40401475 E EGN_Mt090430 20090702
          Length = 465

 Score =  124 bits (311), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 85/112 (75%)

Query: 8   AAQILGEIETLKATKSDIENRIAALEAKLRHLNLPNDNVSSNGSSLPVSIVDYGFGHGLS 67
           A++IL E+E+LK+ K+ IE +I+ LE++L+ +NLP  + SS  ++           +GL 
Sbjct: 5   ASEILQELESLKSEKTKIEQKISQLESQLKDINLPKQHASSASAASSNGSSSPYPTNGLE 64

Query: 68  SDMIYRYSRHLLLPSFGVQGQSNLLKSSILVVGAGGLGSPALLYLAACGVGK 119
             MI+RYSRHL+LPSFGVQGQ+NLLKSSILVVGAGGLG+PALLY AA GVGK
Sbjct: 65  PHMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAASGVGK 116