Jatropha Genome Database

JcCB0156231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0156231.10 + phase: 0 /partial
         (104 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g127940.1 Protein of unknown function DUF676, hydrola...   149   4e-37
IMGA|Medtr1g008450.1 ZW18, putative chr01_pseudomolecule_IMGAG_V...    88   9e-19
IMGA|Medtr1g008460.1 ZW18, putative chr01_pseudomolecule_IMGAG_V...    82   1e-16

>IMGA|Medtr3g127940.1 Protein of unknown function DUF676,
           hydrolase-like chr03_pseudomolecule_IMGAG_V3
           32637681-32628919 H EGN_Mt090430 20090702
          Length = 782

 Score =  149 bits (376), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 69/98 (70%), Positives = 85/98 (86%), Gaps = 1/98 (1%)

Query: 6   QQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSE-YASIGTPARVVQYEAHDMDSDSIYGA 64
           ++IA+Y+HRFHNLDLF+QG+Y+IK+ +RWEDSE   S G PARVVQYEA D+D  SIYGA
Sbjct: 16  KEIAVYLHRFHNLDLFKQGWYRIKIKVRWEDSENINSFGIPARVVQYEAPDLDQSSIYGA 75

Query: 65  WRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSK 102
           W+I+DT+NSF TQ FRIKYARQDV+L +MISFDLS S+
Sbjct: 76  WKIDDTENSFSTQTFRIKYARQDVHLCMMISFDLSRSR 113


>IMGA|Medtr1g008450.1 ZW18, putative chr01_pseudomolecule_IMGAG_V3
          758662-759483 E EGN_Mt090430 20090702
          Length = 65

 Score = 88.2 bits (217), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 45/53 (84%)

Query: 1  MWDTVQQIAIYIHRFHNLDLFQQGFYQIKVTMRWEDSEYASIGTPARVVQYEA 53
          M++ VQ+IAIYIHRFHNLDL  QG+YQ+KVTMRWED+E  S G PARVVQYE 
Sbjct: 12 MFEAVQEIAIYIHRFHNLDLLHQGWYQLKVTMRWEDNENMSFGIPARVVQYEG 64


>IMGA|Medtr1g008460.1 ZW18, putative chr01_pseudomolecule_IMGAG_V3
           760654-767100 E EGN_Mt090430 20090702
          Length = 536

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/52 (69%), Positives = 44/52 (84%)

Query: 53  AHDMDSDSIYGAWRINDTDNSFLTQPFRIKYARQDVYLSVMISFDLSLSKYK 104
           A D    S+YG WRI+DTDNSF TQPFRIKYARQDV+L +M+SF+LSLS++K
Sbjct: 81  APDQGPCSLYGIWRIDDTDNSFSTQPFRIKYARQDVHLCMMVSFNLSLSRFK 132