Jatropha Genome Database
- JcCB0155711.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0155711.10 + phase: 0 /pseudo/partial
(283 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g048960.1 SBP chr05_pseudomolecule_IMGAG_V3 20837686-... 174 3e-44
IMGA|Medtr8g005760.1 SBP chr08_pseudomolecule_IMGAG_V3 432771-43... 130 6e-31
IMGA|Medtr3g150760.1 SBP chr03_pseudomolecule_IMGAG_V3 39775701-... 130 7e-31
IMGA|Medtr1g039740.1 SBP chr01_pseudomolecule_IMGAG_V3 9171515-9... 127 6e-30
IMGA|Medtr7g133730.1 SBP chr07_pseudomolecule_IMGAG_V3 31375970-... 127 7e-30
IMGA|Medtr7g111590.1 SBP chr07_pseudomolecule_IMGAG_V3 26270007-... 127 8e-30
IMGA|Medtr1g105980.1 SBP chr01_pseudomolecule_IMGAG_V3 21978752-... 125 3e-29
IMGA|Medtr3g103970.1 SBP chr03_pseudomolecule_IMGAG_V3 25716488-... 122 3e-28
IMGA|Medtr2g017680.1 SBP chr02_pseudomolecule_IMGAG_V3 4460201-4... 120 7e-28
IMGA|Medtr7g041140.1 SBP chr07_pseudomolecule_IMGAG_V3 10484187-... 79 2e-15
IMGA|Medtr2g025690.1 SBP chr02_pseudomolecule_IMGAG_V3 6865355-6... 69 2e-12
IMGA|Medtr7g041150.1 SBP chr07_pseudomolecule_IMGAG_V3 10487137-... 54 6e-08
IMGA|Medtr8g077560.1 SBP chr08_pseudomolecule_IMGAG_V3 15471019-... 52 4e-07
>IMGA|Medtr5g048960.1 SBP chr05_pseudomolecule_IMGAG_V3
20837686-20832720 E EGN_Mt090430 20090702
Length = 503
Score = 174 bits (442), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 149/280 (53%), Gaps = 12/280 (4%)
Query: 1 MQPWSYVHGGKD-IVSRETISSSDTIAKSRNALLGWDLKTA-SFGNNMVISSQQAIENQN 58
M+ WSY+ + + S E S D +SR L+ W+ K++ +F + S ++ +++
Sbjct: 1 MESWSYIPEERSYLFSDEMDFSLDAFMRSRKPLVEWENKSSCNFERDGFNSDREVVKSME 60
Query: 59 FGHLSYQEMMGKQLPDNSIRVSLSSEVDVG-----KIINPFIVNNTNSFXXXXXXXXXXX 113
F L + M + S++ S S E+D + + ++ +SF
Sbjct: 61 FVDLGF-PMESSRTVRGSVQTS-SCELDSNNSSKRENSSVHVIAFDSSFAEEDSEAKHLS 118
Query: 114 XXXXXXXXXXXXXFIDLKLGRFGDPTTDAQNSRTXXXXXXXXXXXXXNPPKRMRPG-VNS 172
IDLKLGR D + KR R + +
Sbjct: 119 SRVESKNHDSS--LIDLKLGRLVDCRGGGSDRDGKTFTSESMPIHQNVLAKRSRTSSLPA 176
Query: 173 HTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDD 232
CQVYGCN DLSSSK+YHKRHKVC+VHSKTAKVIVNG+EQRFCQQCSRFHL+AEFDD
Sbjct: 177 LAPVCQVYGCNMDLSSSKDYHKRHKVCDVHSKTAKVIVNGVEQRFCQQCSRFHLVAEFDD 236
Query: 233 GKRSCRKRLAGHNERRRKPQVGLHAGRTGRLIQSYNAXEI 272
GKRSCR+RLAGHNERRRKPQ + +++QSY ++
Sbjct: 237 GKRSCRRRLAGHNERRRKPQFDYMTSKQHKILQSYQGNDV 276
>IMGA|Medtr8g005760.1 SBP chr08_pseudomolecule_IMGAG_V3
432771-430419 E EGN_Mt090430 20090702
Length = 327
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 162 PPKRMRPGVNSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQC 221
PP+ G +S++ CQ GCN DLS +K YH+RHKVCE HSK A V+ G+ QRFCQQC
Sbjct: 173 PPEPGSTG-SSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVVAAGLTQRFCQQC 231
Query: 222 SRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 252
SRFHLL+EFD+GKRSCRKRLA HN RRRK Q
Sbjct: 232 SRFHLLSEFDNGKRSCRKRLADHNRRRRKTQ 262
>IMGA|Medtr3g150760.1 SBP chr03_pseudomolecule_IMGAG_V3
39775701-39772495 E EGN_Mt090430 20090702
Length = 376
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 128 IDLKLGRFGDPTTDAQ----NSRTXXXXXXXXXXXXXNPPKRMRPGVN--SHTAYCQVYG 181
+DLKLG+ G+ TD ++ KR R N + T C V G
Sbjct: 43 VDLKLGQVGNSATDQSPLPLSNDAVVVSKIATPTSSSGSSKRARAMNNNTTLTVSCLVDG 102
Query: 182 CNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRL 241
CN DLS+ ++YH+RHKVCE+HSKT +V + G++QRFCQQCSRFH L +FD+ KRSCRKRL
Sbjct: 103 CNSDLSNCRDYHRRHKVCELHSKTPEVTICGLKQRFCQQCSRFHSLEQFDERKRSCRKRL 162
Query: 242 AGHNERRRKPQVGLHAGRTGRLIQSY 267
GHN RRRKPQ G + +Y
Sbjct: 163 DGHNRRRRKPQPEPITRPAGSFLSNY 188
>IMGA|Medtr1g039740.1 SBP chr01_pseudomolecule_IMGAG_V3
9171515-9165499 E EGN_Mt090430 20090702
Length = 1003
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 70/93 (75%), Gaps = 2/93 (2%)
Query: 162 PPKRMRPGVNSHTAY--CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQ 219
P KR+R G + +Y CQV C +DLS +K+YH+RHKVCE HSK +K ++ QRFCQ
Sbjct: 87 PNKRIRSGSPTSASYPMCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQ 146
Query: 220 QCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 252
QCSRFH L EFD+GKRSCR+RLAGHN RRRK Q
Sbjct: 147 QCSRFHPLVEFDEGKRSCRRRLAGHNRRRRKTQ 179
>IMGA|Medtr7g133730.1 SBP chr07_pseudomolecule_IMGAG_V3
31375970-31373239 E EGN_Mt090430 20090702
Length = 259
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 70/86 (81%)
Query: 165 RMRPGVNSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRF 224
R+ G +S A+CQV C DL+++K+YH+RHKVCE+HSK +K +V QRFCQQCSRF
Sbjct: 133 RVAGGGSSSRAFCQVEDCRADLNNAKDYHRRHKVCEIHSKASKALVGNAMQRFCQQCSRF 192
Query: 225 HLLAEFDDGKRSCRKRLAGHNERRRK 250
HLL EFD+GKRSCR+RLAGHN+RRRK
Sbjct: 193 HLLQEFDEGKRSCRRRLAGHNKRRRK 218
>IMGA|Medtr7g111590.1 SBP chr07_pseudomolecule_IMGAG_V3
26270007-26266156 E EGN_Mt090430 20090702
Length = 411
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 63/75 (84%)
Query: 177 CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 236
CQV GC DL+ +K Y+ RHKVC +HSK+ V V+G++QRFCQQCSRFH LAEFD GKRS
Sbjct: 142 CQVEGCKLDLTDAKAYYSRHKVCSMHSKSPTVTVSGLQQRFCQQCSRFHQLAEFDQGKRS 201
Query: 237 CRKRLAGHNERRRKP 251
CR+RLAGHNERRRKP
Sbjct: 202 CRRRLAGHNERRRKP 216
>IMGA|Medtr1g105980.1 SBP chr01_pseudomolecule_IMGAG_V3
21978752-21986357 E EGN_Mt090430 20090702
Length = 1003
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 65/82 (79%)
Query: 169 GVNSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLA 228
G S+ A CQV C DLS K+YH+RHKVCE+HSK ++ +V QRFCQQCSRFH+L
Sbjct: 139 GGTSNRAVCQVEDCGADLSRGKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRFHILE 198
Query: 229 EFDDGKRSCRKRLAGHNERRRK 250
EFD+GKRSCR+RLAGHN+RRRK
Sbjct: 199 EFDEGKRSCRRRLAGHNKRRRK 220
>IMGA|Medtr3g103970.1 SBP chr03_pseudomolecule_IMGAG_V3
25716488-25712514 E EGN_Mt090430 20090702
Length = 448
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 64/76 (84%)
Query: 177 CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 236
CQV GC DLS +K+YH++H++C+ HSK+ V+V G+E+RFCQQCSRFH L+EFDD KRS
Sbjct: 166 CQVEGCGLDLSFAKDYHRKHRICDSHSKSPVVVVAGLERRFCQQCSRFHDLSEFDDKKRS 225
Query: 237 CRKRLAGHNERRRKPQ 252
CR+RL+ HN RRRKPQ
Sbjct: 226 CRRRLSDHNARRRKPQ 241
>IMGA|Medtr2g017680.1 SBP chr02_pseudomolecule_IMGAG_V3
4460201-4463064 E EGN_Mt090430 20090702
Length = 143
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%)
Query: 174 TAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDG 233
T CQV CN DLS++K+YHKRHKVCE HSK V+++ ++QRFCQQCSRFH ++EFDD
Sbjct: 61 TPSCQVDNCNADLSAAKQYHKRHKVCENHSKAHSVLISELQQRFCQQCSRFHEVSEFDDL 120
Query: 234 KRSCRKRLAGHNERRRKPQVGLH 256
KRSCR+RLAGHNERRRK H
Sbjct: 121 KRSCRRRLAGHNERRRKSASEYH 143
>IMGA|Medtr7g041140.1 SBP chr07_pseudomolecule_IMGAG_V3
10484187-10485668 E EGN_Mt090430 20090702
Length = 207
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Query: 170 VNSHTAY--CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSR 223
V +TA CQV GCN L ++KEYH+RHKVCE+HSK KV+V G+EQRFCQQCSR
Sbjct: 140 VGGYTAVTRCQVDGCNVALMNAKEYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSR 195
>IMGA|Medtr2g025690.1 SBP chr02_pseudomolecule_IMGAG_V3
6865355-6872772 E EGN_Mt090430 20090702
Length = 742
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 198 VCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVGLHA 257
VC + A V+++G +R+CQQC +FH+L++FD+GKRSCR++L HN RRR+ V
Sbjct: 108 VCLRCANAATVVLDGDVKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNTRRRRKAVDSAV 167
Query: 258 G 258
G
Sbjct: 168 G 168
>IMGA|Medtr7g041150.1 SBP chr07_pseudomolecule_IMGAG_V3
10487137-10487936 H EGN_Mt090430 20090702
Length = 121
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/27 (81%), Positives = 26/27 (96%)
Query: 224 FHLLAEFDDGKRSCRKRLAGHNERRRK 250
FH+++EFDD KRSCR+RLAGHNERRRK
Sbjct: 3 FHVVSEFDDSKRSCRRRLAGHNERRRK 29
>IMGA|Medtr8g077560.1 SBP chr08_pseudomolecule_IMGAG_V3
15471019-15471336 H EGN_Mt090430 20090702
Length = 105
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 127 FIDLKLGRFGDPTTDAQNSRTXXXXXXXXXXXXXNPPKRMRPGVNSHTAYCQVY-----G 181
F+DLKLG G+ + ++ +++ + + Q+ G
Sbjct: 7 FVDLKLGHVGNSSAESGLTKSKDVGGFTKITSSSSSTSGSSKKARAINNGTQIVSSLADG 66
Query: 182 CNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRF 217
C DLS+ + YH RHKVC++HSKT++V + G +QRF
Sbjct: 67 CQADLSNYRGYHMRHKVCKLHSKTSQVTLGGHKQRF 102