Jatropha Genome Database

JcCB0155101.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0155101.20 + phase: 0 /partial
         (93 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g109830.1 Protein kinase; Cytochrome c, monohaem chr0...   162   5e-41
IMGA|Medtr8g109920.1 Cytochrome c, monohaem; Protein kinase-like...   162   5e-41

>IMGA|Medtr8g109830.1 Protein kinase; Cytochrome c, monohaem
          chr08_pseudomolecule_IMGAG_V3 24725261-24718828 E
          EGN_Mt090430 20090702
          Length = 381

 Score =  162 bits (409), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 77/93 (82%), Positives = 82/93 (88%), Gaps = 2/93 (2%)

Query: 1  MPPP--VDFKDIQDKLSFHFRPWQRSFQFWVRAVDVYTGYKVFQLRVSLVKDVQKQEAMW 58
          M PP  VD  DI+ KLS  FRP QRSFQFWVRAVD+YTGYKVFQLRV+ VKD QKQEAMW
Sbjct: 1  MLPPIVVDLNDIKQKLSLQFRPIQRSFQFWVRAVDIYTGYKVFQLRVNFVKDAQKQEAMW 60

Query: 59 ERQHELAADKIYAMCSDLGGFFLKIAQIIGKPD 91
          ERQHELAADKI++MCSDLGGFFLKIAQIIGKPD
Sbjct: 61 ERQHELAADKIFSMCSDLGGFFLKIAQIIGKPD 93


>IMGA|Medtr8g109920.1 Cytochrome c, monohaem; Protein kinase-like
          chr08_pseudomolecule_IMGAG_V3 24789042-24784887 E
          EGN_Mt090430 20090702
          Length = 297

 Score =  162 bits (409), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 77/93 (82%), Positives = 82/93 (88%), Gaps = 2/93 (2%)

Query: 1  MPPP--VDFKDIQDKLSFHFRPWQRSFQFWVRAVDVYTGYKVFQLRVSLVKDVQKQEAMW 58
          M PP  VD  DI+ KLS  FRP QRSFQFWVRAVD+YTGYKVFQLRV+ VKD QKQEAMW
Sbjct: 1  MLPPIVVDLNDIKQKLSLQFRPIQRSFQFWVRAVDIYTGYKVFQLRVNFVKDAQKQEAMW 60

Query: 59 ERQHELAADKIYAMCSDLGGFFLKIAQIIGKPD 91
          ERQHELAADKI++MCSDLGGFFLKIAQIIGKPD
Sbjct: 61 ERQHELAADKIFSMCSDLGGFFLKIAQIIGKPD 93