Jatropha Genome Database

JcCB0150481.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0150481.20 - phase: 0 
         (229 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g160310.1 Protein of unknown function DUF706 chr04_ps...   407   e-114
IMGA|Medtr4g160310.2 Protein of unknown function DUF706 chr04_ps...   160   5e-40

>IMGA|Medtr4g160310.1 Protein of unknown function DUF706
           chr04_pseudomolecule_IMGAG_V3 40614656-40612299 E
           EGN_Mt090430 20090702
          Length = 316

 Score =  407 bits (1046), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 187/229 (81%), Positives = 209/229 (91%)

Query: 1   MREEYGKLNRVEMSIWECCQLLNNVVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHL 60
           MREEY KL++ EMSIWECC+LLN VVDESDPDLDEPQI+HLLQ+AEAIRKDYPNEDWLHL
Sbjct: 88  MREEYKKLDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHL 147

Query: 61  TGLIHDLGKVLLHPSFGELAQWAVVGDTYPVGCAFDESIVHHKYFKENPDFNNPAYNTKY 120
           T LIHDLGK+LL P FGEL QWAVVGDT+P+GCAFDES VHHKYFKENPD  +PAYNTK 
Sbjct: 148 TALIHDLGKILLLPKFGELPQWAVVGDTFPLGCAFDESNVHHKYFKENPDIKSPAYNTKN 207

Query: 121 GVYSEGCGLNNVMMSWGHDDYMYLVAKQNKTSLPSAALFIIRYHSFYALHRSGAYKHLMN 180
           G+Y+EGCGL+NVMMSWGHDDYM +VAK+N ++LP+A LFIIRYHSFY LH+ GAY HLMN
Sbjct: 208 GIYNEGCGLDNVMMSWGHDDYMTMVAKENGSTLPNAGLFIIRYHSFYPLHKEGAYTHLMN 267

Query: 181 EEDIENLKWLQIFNKYDLYSKSKVRVDVEKVKPYYLSLIDKYFPAKLKW 229
           EED ENLKWL IFNKYDLYSKSKV VDVE+V+PYYLSLI+KYFPAKL+W
Sbjct: 268 EEDFENLKWLHIFNKYDLYSKSKVLVDVEEVRPYYLSLIEKYFPAKLRW 316


>IMGA|Medtr4g160310.2 Protein of unknown function DUF706
           chr04_pseudomolecule_IMGAG_V3 40614656-40612299 E
           EGN_Mt090430 20090702
          Length = 173

 Score =  160 bits (405), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 73/86 (84%), Positives = 79/86 (91%)

Query: 1   MREEYGKLNRVEMSIWECCQLLNNVVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHL 60
           MREEY KL++ EMSIWECC+LLN VVDESDPDLDEPQI+HLLQ+AEAIRKDYPNEDWLHL
Sbjct: 88  MREEYKKLDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHL 147

Query: 61  TGLIHDLGKVLLHPSFGELAQWAVVG 86
           T LIHDLGK+LL P FGEL QWAVVG
Sbjct: 148 TALIHDLGKILLLPKFGELPQWAVVG 173