Jatropha Genome Database

JcCB0149951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0149951.10 + phase: 1 /partial
         (195 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g069700.1 Enolase chr06_pseudomolecule_IMGAG_V3 12938...   279   6e-76
IMGA|Medtr5g104640.1 Enolase chr05_pseudomolecule_IMGAG_V3 41981...   223   4e-59

>IMGA|Medtr6g069700.1 Enolase chr06_pseudomolecule_IMGAG_V3
           12938141-12943135 E EGN_Mt090430 20090702
          Length = 434

 Score =  279 bits (713), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 137/198 (69%), Positives = 160/198 (80%), Gaps = 4/198 (2%)

Query: 2   QIKIGMDVAASEFLTKDGK-YDLNFKKQPNDGAHVLSAQNLGELYKEFIKDFPIVSIEDP 60
           ++ IGMDVAASEF    GK YDLNFK++ NDG+  +S  +L  +YK F+ D+PIVSIEDP
Sbjct: 233 KVVIGMDVAASEFYDNKGKTYDLNFKEENNDGSEKISGDSLKNVYKSFVSDYPIVSIEDP 292

Query: 61  FDQDDWSSWASLQSSV--DIQLVGDDLLVTNPKRIAEAIQKKACNGLLLKVNQIGSVTES 118
           FDQDDW  ++ L + +   +Q+VGDDLLVTNPKR+ +AI++K+CN LLLKVNQIGSVTES
Sbjct: 293 FDQDDWEHYSKLTAEMGQQVQIVGDDLLVTNPKRVEKAIKEKSCNALLLKVNQIGSVTES 352

Query: 119 IRAALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRI 178
           I A   SK AGWGVM SHRSGETED FIADLSVGLA+GQIKTGAPCRSERLAKYNQLLRI
Sbjct: 353 IEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRI 412

Query: 179 EEELGNVR-YAGEAFRSP 195
           EEELG    YAG  FR+P
Sbjct: 413 EEELGAAAVYAGSKFRAP 430


>IMGA|Medtr5g104640.1 Enolase chr05_pseudomolecule_IMGAG_V3
           41981079-41989044 E EGN_Mt090430 20090702
          Length = 415

 Score =  223 bits (569), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 113/193 (58%), Positives = 139/193 (72%), Gaps = 2/193 (1%)

Query: 2   QIKIGMDVAASEFLTKDGKYDLNFKKQPNDGAHVLSAQNLGELYKEFIKDFPIVSIEDPF 61
           +IKI +DVA + F     +YDL+FK     G +  SA+++ ELYKE   ++PIVSIEDPF
Sbjct: 223 KIKIALDVAGTNFCIGK-RYDLDFKSPQKSGQNFKSAEDMIELYKELCTEYPIVSIEDPF 281

Query: 62  DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKACNGLLLKVNQIGSVTESIRA 121
           D++DW     + S    Q+VGDDLL++N KRI  A+ + ACN LLLKVNQ+G+VTE I  
Sbjct: 282 DKEDWEHIKYISSLGICQVVGDDLLMSNAKRIERAVTESACNALLLKVNQVGTVTEVIEV 341

Query: 122 ALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEE 181
              +K A WGV+ SHRSGET D+FIADLSVGLA GQIK GAPCR ERL KYNQLLRIEEE
Sbjct: 342 VKQAKEAHWGVVTSHRSGETVDSFIADLSVGLAVGQIKAGAPCRGERLEKYNQLLRIEEE 401

Query: 182 LGN-VRYAGEAFR 193
           LG+   YAGE +R
Sbjct: 402 LGDQAVYAGEDWR 414