Jatropha Genome Database

JcCB0148401.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0148401.10 - phase: 0 /pseudo
         (449 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g126850.1 Alpha amylase, catalytic region chr07_pseud...   291   5e-79
IMGA|Medtr7g126860.1 Glycoside hydrolase, family 13, N-terminal;...   147   1e-35
IMGA|Medtr3g150300.1 Alpha amylase, catalytic region; Pullulanas...    57   2e-08
IMGA|Medtr4g160980.1 Alpha amylase, catalytic region; ; chr04_ps...    50   2e-06

>IMGA|Medtr7g126850.1 Alpha amylase, catalytic region
           chr07_pseudomolecule_IMGAG_V3 29573147-29570680 E
           EGN_Mt090430 20090702
          Length = 233

 Score =  291 bits (744), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 134/192 (69%), Positives = 158/192 (82%), Gaps = 3/192 (1%)

Query: 244 ERYQFEYPRPPKPRAPRIYEAHVGMSSSEPRVNTYREFADDVLPRIRANNYNTVQLMAVM 303
           E+Y F++P+P +P++ RIYEAHVGMSS EP++NTY  F DDVLPRI+   YN VQ+MA+ 
Sbjct: 34  EKYVFKHPQPKRPQSIRIYEAHVGMSSPEPKINTYANFRDDVLPRIKKLGYNAVQIMAIQ 93

Query: 304 EHSYYGSFGYHVTNFFAVSSRSGTPEDLKYLIDKAHSLGLCVLMDVIHSHASNNVTDGLN 363
           EHSYY SFGYHVTNFFA SSR GTPEDLK LID+AH LGL VLMD++HSHAS+N  DGLN
Sbjct: 94  EHSYYASFGYHVTNFFAPSSRFGTPEDLKSLIDRAHELGLLVLMDIVHSHASSNTLDGLN 153

Query: 364 GFDVGQSSQESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRWWLEEYKFDGFRFDG 423
            FD    +   YFH+G RGYH +WDSRLFNY +WEVLR+LLSN RWWL+EYKFDGFRFDG
Sbjct: 154 MFD---GTDAHYFHSGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKFDGFRFDG 210

Query: 424 VTSMLYHHHGID 435
           VTSM+Y HHG+ 
Sbjct: 211 VTSMMYTHHGLQ 222


>IMGA|Medtr7g126860.1 Glycoside hydrolase, family 13, N-terminal;
           chr07_pseudomolecule_IMGAG_V3 29581116-29574011 E
           EGN_Mt090430 20090702
          Length = 363

 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/157 (45%), Positives = 99/157 (63%), Gaps = 4/157 (2%)

Query: 91  LLSIDPGLGPFKDHFSYRMKRYRNQKEQIEKHEGGLDEFSRGYLKFGFNREEGGIVYREW 150
           +  ID  L   + H  +R  +Y+  +E+I+K+EGGLD FSRGY K GF R   GI YREW
Sbjct: 170 IYEIDTFLQAHRQHLDFRYGQYKKIREEIDKYEGGLDAFSRGYEKLGFTRSATGITYREW 229

Query: 151 APAAEEAQVIGDFNGWDGSNHKMEKNEFGVWSIKI-TDAAGNPAIPHNSRVKFRFKHGNG 209
           AP A+ A ++GDFN W+ +   M +++FGVW I +  +A G+P IPH SRVK      +G
Sbjct: 230 APGAKSAALVGDFNNWNPNADVMTRDDFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSG 289

Query: 210 IWVDRIPAWIRYATVDPSNFGAPYDGVYWDPPASERY 246
           I  D IPAWI+++   P     PY+G+Y+DPP   R+
Sbjct: 290 I-KDSIPAWIKFSVQAPGEI--PYNGIYYDPPEEVRF 323


>IMGA|Medtr3g150300.1 Alpha amylase, catalytic region; Pullulanase,
           type I; ; ; chr03_pseudomolecule_IMGAG_V3
           39571747-39562313 E EGN_Mt090430 20090702
          Length = 672

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 35/172 (20%)

Query: 280 EFADDVLPRIRANNYNTVQLMAVMEHS-------------YYGSFGYHVTNFFAVSSR-- 324
           ++   ++P +     N V+L+ + E                  ++GY   NFFA  SR  
Sbjct: 293 QYGVSMIPHLLELGINAVELLPIFEFDEMELQRRPNPRDHMINTWGYSTINFFAPMSRYA 352

Query: 325 --SGTP----EDLKYLIDKAHSLGLCVLMDVIHSHAS-----NNVTDGLNGFDVGQSSQE 373
              G P    ++LK ++   HS G+ V++DV+++H +     N  T    G D      +
Sbjct: 353 SAGGGPANASQELKQMVKALHSAGIEVILDVVYNHTNEADDPNPYTTSFRGID-----NK 407

Query: 374 SYFHTGDRGYHKLWDSRLFNYANWE---VLRFLLSNLRWWLEEYKFDGFRFD 422
            Y+   D+G   L  S   N  N     V+  +L +LR W+ EY  DGFRFD
Sbjct: 408 VYYMLDDKG-QLLNFSGCGNTLNCNHPVVMDLILDSLRHWVTEYHVDGFRFD 458


>IMGA|Medtr4g160980.1 Alpha amylase, catalytic region; ;
           chr04_pseudomolecule_IMGAG_V3 40981878-40992441 E
           EGN_Mt090430 20090702
          Length = 788

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 24/173 (13%)

Query: 274 RVNTYREFADDVLPRIRANNYNTVQLMA--VMEHSYYGSF-GYHVTNFFAVSSRSGTP-- 328
           +++  +E   + +  +  + +N ++  +   ++  Y  +F GY   N+F+   R  +   
Sbjct: 253 KLDHLKELGVNCIELMPCHEFNELEYYSYNAIQGDYRVNFWGYSTINYFSPMIRYSSAGI 312

Query: 329 --------EDLKYLIDKAHSLGLCVLMDVIHSHASNNVTDG----LNGFDVGQSSQESYF 376
                    ++K LI +AH  G+ V+MDV+ +H +     G      G D        Y+
Sbjct: 313 QNCGRDGINEMKLLIKEAHKRGIEVIMDVVFNHTAEGNEKGPIISFRGVD-----NSVYY 367

Query: 377 HTGDRG--YHKLWDSRLFNYANWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSM 427
               +G  Y+       FN  +  V +F++  LR+W+ E   DGFRFD  + M
Sbjct: 368 MVAPKGEFYNYSGCGNTFNCNHPVVRKFIVDCLRYWVTEMHVDGFRFDLASIM 420